tjthurman BAHZ issues - Githubissues

tjthurman / BAHZ

An R package for Bayesian analysis of hybrid zones

GNU General Public License v3.0

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Allow constant pmins and pmaxs?

#68 tjthurman opened 4 years ago
2
Restructure to reduce compilation time?

#67 tjthurman opened 4 years ago
1
Automate chain, neff, and convergence checks with multiple attempts?

#66 tjthurman opened 4 years ago
1
[BUG]

#65 dongyiyi closed 4 years ago
8
vdiffr for unit testing of the plot outputs?

#64 tjthurman opened 5 years ago
0
Consolidate pheno and geno plotting functions?

#63 tjthurman closed 5 years ago
1
Tighten up redundancies in argument checking of predict, plot, and summary fxns

#62 tjthurman closed 5 years ago
1
In plotting function, save already calculated CIs to save some time?

#61 tjthurman closed 5 years ago
2
Add HPDI ribbon to plotting function?

#60 tjthurman closed 5 years ago
1
Change prior for sigma in pheno models?

#59 tjthurman closed 5 years ago
1
Allow sigma to vary across sites in pheno models?

#58 tjthurman closed 5 years ago
0
[BUG] BAHZ estimates increasing cline when data are from decreasing cline

#57 tjthurman closed 5 years ago
1
Check informativeness of priors?

#56 tjthurman opened 5 years ago
1
checkout purr and invoke_rows

#55 tjthurman closed 5 years ago
1
rethink chain initialization and prior/distributional checks

#54 tjthurman closed 5 years ago
4
Update issue templates

#53 tjthurman closed 5 years ago
1
Website with packagedown?

#52 tjthurman opened 5 years ago
0
some preliminary citation?

#51 tjthurman closed 5 years ago
0
changelog?

#50 tjthurman closed 5 years ago
1
Contributer statement?

#49 tjthurman opened 5 years ago
0
improve plotting functions

#48 tjthurman closed 5 years ago
1
remove loops and vectorize where possible

#47 tjthurman closed 5 years ago
2
improve warning message for incorrect data

#46 tjthurman closed 5 years ago
0
add an upper limit on the center parameter in Stan?

#45 tjthurman closed 5 years ago
2
double check the gitignore and rbuildignore stuff for cpp files

#44 tjthurman closed 5 years ago
1
consolidate binomial down to one file with if/else

#43 tjthurman closed 5 years ago
0
remove "free " from the stan model names

#42 tjthurman closed 5 years ago
0
Something for plotting functions

#41 tjthurman closed 5 years ago
3
change stan running defaults to be safer

#40 tjthurman closed 5 years ago
1
Add cpp files to .Rbuildignore and .gitignore?

#39 tjthurman closed 5 years ago
0
Unit testing

#38 tjthurman closed 5 years ago
0
Multinomial models

#37 tjthurman closed 5 years ago
0
add more init checks to the other parameters which have limitations

#36 tjthurman closed 5 years ago
1
Allow negative values in prior specifications

#35 tjthurman closed 5 years ago
1
on install, display the rstan method about detecting multuple cores?

#34 tjthurman closed 5 years ago
0
Optional argument for fit_geno_cline: user-supplied init list?

#33 tjthurman closed 5 years ago
0
Improve code commenting for all current fxns

#32 tjthurman closed 5 years ago
0
Documentation for all current fxns

#31 tjthurman closed 5 years ago
0
Function renaming?

#30 tjthurman closed 5 years ago
0
rstantools-style pipeline now up and running

#29 tjthurman closed 5 years ago
0
Fix the cache in cline_summary

#28 tjthurman closed 5 years ago
0
check derryberry supp mat for another possible strategy of fitting increasing vs decreasing models

#27 tjthurman closed 5 years ago
1
allow f to be <0?

#26 tjthurman closed 5 years ago
0
In stan, force pmin<pmax and pmax>pmin?

#25 tjthurman closed 5 years ago
1
re-parameterize width for running models?

#24 tjthurman closed 5 years ago
2
match.arg to avoid some of the crazier assertion things?

#23 tjthurman closed 5 years ago
0
Re-structure package to follow the rstan developer guidlines?

#22 tjthurman closed 6 years ago
1
Combine help documentation on internal extract functions

#21 tjthurman closed 6 years ago
1
Update cline equation fxn, split to allow single evaluation or for a vector

#20 tjthurman closed 5 years ago
0
Tons and tons of argument checking across all functions

#19 tjthurman closed 6 years ago
2