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tkkarjal / magia

Automated brain PET analysis pipeline
https://doi.org/10.3389/fninf.2020.00003
MIT License
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Improve ROI correction #20

Closed tkkarjal closed 6 years ago

tkkarjal commented 6 years ago

If MRI is available, make sure the ROIs only include grey matter (using the c1 file). Now for example thalamus can be very bad, and the average grey matter density within thalamus may be less than 0.5.

tkkarjal commented 6 years ago

The grey matter approach was abandoned because a better method that does not require MRI was available.