Open MartGro opened 1 year ago
Hi, I had some issues finding the right versions for pangolin to run. It worked by running:
conda install python=3.6 pip3 install torch==1.8.2 torchvision==0.9.2 torchaudio==0.8.2 --extra-index-url https://download.pytorch.org/whl/lts/1.8/cpu conda install -c conda-forge pyvcf pip install gffutils biopython pandas pyfastx
Here are the conda and pip dependencies: https://gist.github.com/MartGro/dfe979e79800a210faf0b85b43db62b0
Hi, I had some issues finding the right versions for pangolin to run. It worked by running:
Here are the conda and pip dependencies: https://gist.github.com/MartGro/dfe979e79800a210faf0b85b43db62b0