System/server configuration recommendation for running WGS sample with Pangolin

tkzeng / Pangolin

Pangolin is a deep-learning method for predicting splice site strengths.

GNU General Public License v3.0

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System/server configuration recommendation for running WGS sample with Pangolin #20

Open tsivaarumugam opened 5 months ago

tsivaarumugam commented 5 months ago

Dear Team,

We are trying to run the Pangolin tool with one of the GiaB (Genome in a Bottle) WGS sample VCF file. Is there a system configuration recommendation for running Pangolin efficiently for such a large sample ? In other words; Kindly let us know, for running Pangolin for a larger sample, what system/computing server configuration would you recommend ?

Thanks in advance. Siva