Closed amir-azizi closed 4 years ago
Hi @amir-azizi,
in general, SampCompDB requires the path to out_SampComp.db file, without the .bak/.dat/.dir extension. For example, if your results
folder was at /home/user/results
you would call SampCompDB with:
db = SampCompDB(db_fn = "/home/user/results/out_SampComp.db")
Can you please post the full stack trace and the code block (or line) that's giving you the error?
cheers!
Using out_SampComp.db
, without .dat
worked.
Thanks a lot :)
Perfect, glad it worked!
Hello,
I have followed the instructions in https://nanocompore.rna.rocks/demo/SampComp_usage/ The
results
directory contains the following files:When I tried to generate plots,
SampCompDB
cannot load the "database" fileout_SampComp.db.dat
. I even tried removing.dat
suffix. This is the error I get:NanocomporeError: The result database cannot be opened
Could you please let me know what I am doing wrong?
Thanks.