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tleonardi / nanocompore

RNA modifications detection from Nanopore dRNA-Seq data
https://nanocompore.rna.rocks
GNU General Public License v3.0
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Tx compare refactor #54

Closed tleonardi closed 5 years ago

tleonardi commented 5 years ago

I've added unit tests (using pytest) and refactored TxCompare. Now the GMM option can do (and report) both the anova and logit while doing the GMM fitting only once. I've also added the relevant options in the CLI.

tleonardi commented 5 years ago

I've just realised that this breaks SampCompDB.save_report(). I'm fixing it.