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tlnagy / OMETIFF.jl

I/O operations for OME-TIFF files in Julia
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Add support for memory mapping Tiff files #51

Closed tlnagy closed 4 years ago

tlnagy commented 4 years ago

This PR adds support for memory-mapping OMETIFF files, i.e. lazy-loading, virtual stacks, etc. The current version is a read-only variant while I work out the details for writing to disk, which will likely need some coordination with #30.

This PR also resolves some ambiguity related slow downs in filestreams.

Fixes #3

codecov[bot] commented 4 years ago

Codecov Report

Merging #51 into master will decrease coverage by 0.52%. The diff coverage is 91.42%.

Impacted file tree graph

@@            Coverage Diff             @@
##           master      #51      +/-   ##
==========================================
- Coverage   94.29%   93.77%   -0.53%     
==========================================
  Files           5        6       +1     
  Lines         263      289      +26     
==========================================
+ Hits          248      271      +23     
- Misses         15       18       +3
Impacted Files Coverage Δ
src/OMETIFF.jl 100% <ø> (ø) :arrow_up:
src/loader.jl 98.43% <100%> (-0.03%) :arrow_down:
src/files.jl 93.7% <100%> (+0.53%) :arrow_up:
src/mmap.jl 82.35% <82.35%> (ø)

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