tobiasrausch / alfred

BAM Statistics, Feature Counting and Annotation
https://www.gear-genomics.com/alfred/
BSD 3-Clause "New" or "Revised" License
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Replication timing help #116

Open fengchuiguo1994 opened 8 months ago

fengchuiguo1994 commented 8 months ago

I have six repli-Seq data (G1,S1,S2,S3,S4,G2). I want to get the repli value like Repli-chip.

  1. I execute alfred replication. I found that the value are all integers in profile.tsv file. It seems they haven't done any standardization.
  2. I found many -1 in reptime.tsv file, can I remove it ?
  3. How do I convert them (reptime.tsv) to positive and negative values like in repli-chip file