tony-kuo
commented
4 years ago Seems like htslib requires some dependencies you're missing
First try to install libcrypto, in Ubuntu that is: sudo apt-get install libssl-dev
If that's not enough, after installing the library, try adding to the htslib Makefile find "htslib_default_libs" add -lssl -lcrypto
See if that works for you.
git clone htslib and compiled htslib in eagle root folder gcc (Ubuntu 9.3.0-10ubuntu2) 9.3.0
$ make gcc -g -Wall -O2 -pthread -march=native -Lhtslib -Ihtslib -c vector.c util.c calc.c heap.c -lm -lz -llzma -lbz2 -lpthread -lcurl make -C htslib/ make[1]: Entering directory '/home/lufuhao/P5820T1D2T/Programs/eagle/eagle/htslib' make[1]: Nothing to be done for 'all'. make[1]: Leaving directory '/home/lufuhao/P5820T1D2T/Programs/eagle/eagle/htslib' gcc -g -Wall -O2 -pthread -march=native -Lhtslib -Ihtslib eagle.c -o eagle vector.o util.o calc.o heap.o htslib/libhts.a -lm -lz -llzma -lbz2 -lpthread -lcurl /usr/bin/ld: htslib/libhts.a(hfile_s3.o): undefined reference to symbol 'EVP_sha256@@OPENSSL_1_1_0' /usr/bin/ld: /usr/lib/x86_64-linux-gnu/libcrypto.so.1.1: error adding symbols: DSO missing from command line collect2: error: ld returned 1 exit status make: *** [Makefile:17: all] Error 1