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topdownproteomics / sdk

Software solution for common top-down proteomics tasks
http://www.topdownproteomics.org/
MIT License
9 stars 4 forks source link

TopPic Proforma Parser #113

Closed mikehollas123 closed 6 months ago

mikehollas123 commented 7 months ago

Added a parser and tests for converting TopPic Proteoform strings into ProForma

codecov[bot] commented 7 months ago

Codecov Report

Attention: 1 lines in your changes are missing coverage. Please review.

Comparison is base (fc4cf39) 84.68% compared to head (854cac8) 85.32%. Report is 4 commits behind head on master.

Additional details and impacted files [![Impacted file tree graph](https://app.codecov.io/gh/topdownproteomics/sdk/pull/113/graphs/tree.svg?width=650&height=150&src=pr&token=T8Kf00TGxl&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=topdownproteomics)](https://app.codecov.io/gh/topdownproteomics/sdk/pull/113?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=topdownproteomics) ```diff @@ Coverage Diff @@ ## master #113 +/- ## ========================================== + Coverage 84.68% 85.32% +0.64% ========================================== Files 102 103 +1 Lines 5542 5675 +133 Branches 0 878 +878 ========================================== + Hits 4693 4842 +149 + Misses 849 673 -176 - Partials 0 160 +160 ``` | [Files](https://app.codecov.io/gh/topdownproteomics/sdk/pull/113?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=topdownproteomics) | Coverage Δ | | |---|---|---| | [...TopDownProteomics/ProForma/TopPicProformaParser.cs](https://app.codecov.io/gh/topdownproteomics/sdk/pull/113?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=topdownproteomics#diff-c3JjL1RvcERvd25Qcm90ZW9taWNzL1Byb0Zvcm1hL1RvcFBpY1Byb2Zvcm1hUGFyc2VyLmNz) | `99.20% <99.20%> (ø)` | | ... and [34 files with indirect coverage changes](https://app.codecov.io/gh/topdownproteomics/sdk/pull/113/indirect-changes?src=pr&el=tree-more&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=topdownproteomics)