Open crossxwill opened 1 year ago
The method bstSm does not appear to support classProbs=TRUE. I'm requesting that the method support probability predictions. Here's a reprex that shows the error when class probabilities are requested for bstSm.
bstSm
library(caret) ## data set.seed(1) x <- rnorm(1000) z <- -2 + 2*x + rnorm(1000) y <- rbinom(1000, 1, boot::inv.logit(z)) df <- data.frame(y=y, x=x) summary(df) ## response df$label <- factor(ifelse(df$y == 1, "yes", "no"), levels=c("yes","no")) summary(df) ## control fcstHorizon <- 100 initWindow <- 800 param_skip <- fcstHorizon - 1 fitControl_oneSE <- trainControl(method = "timeslice", initialWindow=initWindow, horizon=fcstHorizon, fixedWindow=FALSE, skip=param_skip, ## Estimate class probabilities classProbs = TRUE, ## Evaluate performance using ## the following function summaryFunction = mnLogLoss, selectionFunction="oneSE") ## gamboost set.seed(1) gam_mod <- train( label ~ x, data = df, method = "gamboost", trControl = fitControl_oneSE, metric = "logLoss", dfbase =3 ) plot(gam_mod) ## bstSm (errors out) set.seed(1) bst_mod <- train( label ~ x, data = df, method = "bstSm", trControl = fitControl_oneSE, metric = "logLoss" ) plot(bst_mod)
The method
bstSm
does not appear to support classProbs=TRUE. I'm requesting that the method support probability predictions. Here's a reprex that shows the error when class probabilities are requested forbstSm
.