SteveLauC
commented
3 months ago Could you please take a look at this issue #519 and try the workaround here to see if it works or not
Open nam1962 opened 3 months ago
SteveLauC
commented
3 months ago Could you please take a look at this issue #519 and try the workaround here to see if it works or not
Erroneous Behavior
Expected Behavior
Steps to reproduce
Launch topgrade
Problem persists without calling from topgrade
Did you run topgrade through
Remote ExecutionConfiguration file (Optional)
Additional Details
Operation System/Version
Installation
cargo
topgrade -V) Topgrade 14.0.1Verbose Output (
topgrade -v)➜ .oh-my-zsh git:(master) topgrade -v DEBUG Configuration at /home/sum/.config/topgrade.toml DEBUG Loaded configuration: ConfigFile { include: None, misc: Some(Misc { pre_sudo: None, sudo_command: None, disable: None, ignore_failures: None, remote_topgrades: None, remote_topgrade_path: None, ssh_arguments: None, tmux_arguments: None, set_title: None, display_time: None, assume_yes: None, no_retry: None, run_in_tmux: None, cleanup: None, notify_each_step: None, skip_notify: None, bashit_branch: None, only: None, no_self_update: None, log_filters: None }), pre_commands: Some({}), post_commands: None, commands: Some({}), python: None, composer: Some(Composer { self_update: None }), brew: Some(Brew { greedy_cask: None, autoremove: None }), linux: Some(Linux { yay_arguments: None, aura_aur_arguments: None, aura_pacman_arguments: None, arch_package_manager: None, show_arch_news: None, garuda_update_arguments: None, trizen_arguments: None, pikaur_arguments: None, pamac_arguments: None, dnf_arguments: None, nix_arguments: None, nix_env_arguments: None, apt_arguments: None, enable_tlmgr: None, redhat_distro_sync: None, suse_dup: None, rpm_ostree: None, emerge_sync_flags: None, emerge_update_flags: None, home_manager_arguments: None }), git: Some(Git { max_concurrency: None, arguments: None, repos: None, pull_predefined: None }), containers: None, windows: Some(Windows { accept_all_updates: None, self_rename: None, open_remotes_in_new_terminal: None, enable_winget: None, wsl_update_pre_release: None, wsl_update_use_web_download: None }), npm: None, yarn: None, vim: None, firmware: None, vagrant: None, flatpak: None, distrobox: None } DEBUG Version: 14.0.1 DEBUG OS: x86_64-unknown-linux-gnu DEBUG Args { inner: ["topgrade", "-v"] } DEBUG Binary path: Ok("/usr/bin/topgrade") DEBUG self-update Feature Enabled: true DEBUG Configuration: Config { opt: CommandLineArgs { edit_config: false, show_config_reference: false, run_in_tmux: false, cleanup: false, dry_run: false, no_retry: false, disable: [], only: [], custom_commands: [], env: [], verbose: true, keep_at_end: false, skip_notify: false, yes: None, disable_predefined_git_repos: false, config: None, remote_host_limit: None, show_skipped: false, log_filter: "warn", gen_completion: None, gen_manpage: false, no_self_update: false }, config_file: ConfigFile { include: None, misc: Some(Misc { pre_sudo: None, sudo_command: None, disable: None, ignore_failures: None, remote_topgrades: None, remote_topgrade_path: None, ssh_arguments: None, tmux_arguments: None, set_title: None, display_time: None, assume_yes: None, no_retry: None, run_in_tmux: None, cleanup: None, notify_each_step: None, skip_notify: None, bashit_branch: None, only: None, no_self_update: None, log_filters: None }), pre_commands: Some({}), post_commands: None, commands: Some({}), python: None, composer: Some(Composer { self_update: None }), brew: Some(Brew { greedy_cask: None, autoremove: None }), linux: Some(Linux { yay_arguments: None, aura_aur_arguments: None, aura_pacman_arguments: None, arch_package_manager: None, show_arch_news: None, garuda_update_arguments: None, trizen_arguments: None, pikaur_arguments: None, pamac_arguments: None, dnf_arguments: None, nix_arguments: None, nix_env_arguments: None, apt_arguments: None, enable_tlmgr: None, redhat_distro_sync: None, suse_dup: None, rpm_ostree: None, emerge_sync_flags: None, emerge_update_flags: None, home_manager_arguments: None }), git: Some(Git { max_concurrency: None, arguments: None, repos: None, pull_predefined: None }), containers: None, windows: Some(Windows { accept_all_updates: None, self_rename: None, open_remotes_in_new_terminal: None, enable_winget: None, wsl_update_pre_release: None, wsl_update_use_web_download: None }), npm: None, yarn: None, vim: None, firmware: None, vagrant: None, flatpak: None, distrobox: None }, allowed_steps: [AM, AppMan, Asdf, Atom, Audit, Bin, Bob, BrewCask, BrewFormula, Bun, BunPackages, Cargo, Chezmoi, Chocolatey, Choosenim, Composer, Conda, ConfigUpdate, Containers, CustomCommands, DebGet, Deno, Distrobox, DkpPacman, Dotnet, Emacs, Firmware, Flatpak, Flutter, Fossil, Gcloud, Gem, Ghcup, GithubCliExtensions, GitRepos, GnomeShellExtensions, Go, Guix, Haxelib, Helm, HomeManager, Jetpack, Julia, Juliaup, Kakoune, Helix, Krew, Lure, Macports, Mamba, Miktex, Mas, Maza, Micro, Myrepos, Nix, Node, Opam, Pacdef, Pacstall, Pearl, Pip3, PipReview, PipReviewLocal, Pipupgrade, Pipx, Pkg, Pkgin, Pnpm, Powershell, Protonup, Raco, Rcm, Remotes, Restarts, Rtcl, RubyGems, Rustup, Scoop, Sdkman, SelfUpdate, Sheldon, Shell, Snap, Sparkle, Spicetify, Stack, Stew, System, Tldr, Tlmgr, Tmux, Toolbx, Vagrant, Vcpkg, Vim, Vscode, Winget, Wsl, WslUpdate, Yadm, Yarn] } DEBUG Detected "/usr/bin/git" as "git" DEBUG Cannot find "pwsh" DEBUG Cannot find "powershell" DEBUG Path "/home/sum/.config/emacs" doesn't exist DEBUG Path "/home/sum/.emacs.d" exists DEBUG Path "/home/sum/.emacs.d/bin/doom" doesn't exist DEBUG Cannot find "doas" DEBUG Detected "/usr/bin/sudo" as "sudo" DEBUG Step "Self Update" ── 10:35:03 - Self update ────────────────────────────────────────────────────── Checking target-arch... x86_64-unknown-linux-gnu Checking current version... v14.0.1 Checking latest released version... DEBUG starting new connection: https://api.github.com/ DEBUG resolving host="api.github.com" DEBUG connecting to 140.82.121.5:443 DEBUG connected to 140.82.121.5:443 DEBUG No cached session for DnsName("api.github.com") DEBUG Not resuming any session DEBUG Using ciphersuite TLS13_AES_128_GCM_SHA256 DEBUG Not resuming DEBUG TLS1.3 encrypted extensions: [ServerNameAck, Protocols([ProtocolName(6832)])] DEBUG ALPN protocol is Some(b"h2") DEBUG binding client connection DEBUG client connection bound DEBUG send frame=Settings { flags: (0x0), enable_push: 0, initial_window_size: 2097152, max_frame_size: 16384 } DEBUG Connection{peer=Client}: new DEBUG Connection{peer=Client}: send frame=WindowUpdate { stream_id: StreamId(0), size_increment: 5177345 } DEBUG pooling idle connection for ("https", api.github.com) DEBUG Connection{peer=Client}: send frame=Headers { stream_id: StreamId(1), flags: (0x5: END_HEADERS | END_STREAM) } DEBUG Connection{peer=Client}: received frame=Settings { flags: (0x0), max_concurrent_streams: 100, initial_window_size: 67108864, max_frame_size: 68608, enable_connect_protocol: 1 } DEBUG Connection{peer=Client}: send frame=Settings { flags: (0x1: ACK) } DEBUG Connection{peer=Client}: received frame=Settings { flags: (0x1: ACK) } DEBUG Connection{peer=Client}: received settings ACK; applying Settings { flags: (0x0), enable_push: 0, initial_window_size: 2097152, max_frame_size: 16384 } DEBUG Connection{peer=Client}: received frame=Headers { stream_id: StreamId(1), flags: (0x4: END_HEADERS) } DEBUG Connection{peer=Client}: received frame=Data { stream_id: StreamId(1), flags: (0x1: END_STREAM) } DEBUG Connection{peer=Client}: close v14.0.1 Topgrade is up-to-date DEBUG Step "packer.nu" DEBUG Step "System update" ── 10:35:03 - System update ──────────────────────────────────────────────────── DEBUG Cannot find "powerpill" DEBUG Cannot find "garuda-update" DEBUG Cannot find "paru" DEBUG Detected "/usr/bin/yay" as "yay" DEBUG Executing command `/usr/bin/yay -Pw` DEBUG Executing command `/usr/bin/yay --pacman pacman -Syu` [sudo] password for sum: :: Synchronizing package databases... core is up to date extra is up to date community is up to date multilib is up to date :: Searching AUR for updates... :: Searching databases for updates... -> Packages not in AUR: podman-dnsname pycharm-edu -> podofo-0.9: local (0.9.8-5) is newer than AUR (0.9.8-2) there is nothing to do DEBUG Step "config-update" DEBUG Step "am" DEBUG Step "appman" DEBUG Step "deb-get" DEBUG Step "toolbx" DEBUG Step "snap" DEBUG Step "pacstall" DEBUG Step "pacdef" DEBUG Step "protonup" DEBUG Step "distrobox" DEBUG Detected "/usr/bin/distrobox" as "distrobox" ── 10:35:10 - Distrobox ──────────────────────────────────────────────────────── DEBUG Executing command `/usr/bin/distrobox upgrade --all` DEBUG Step "dkp-pacman" DEBUG Step "pihole" DEBUG Step "Firmware upgrades" DEBUG Step "Restarts" DEBUG Step "Flatpak" DEBUG Detected "/usr/bin/flatpak" as "flatpak" ── 10:35:10 - Flatpak User Packages ──────────────────────────────────────────── DEBUG Executing command `/usr/bin/flatpak update --user` Looking for updates… Nothing to do. ── 10:35:10 - Flatpak System Packages ────────────────────────────────────────── DEBUG Executing command `/usr/bin/flatpak update --system` Looking for updates… Info: runtime org.gnome.Platform branch 43 is end-of-life, with reason: The GNOME 43 runtime is no longer supported as of September 20, 2023. Please ask your application developer to migrate to a supported platform. Info: applications using this runtime: com.github.muriloventuroso.easyssh, io.github.nate_xyz.Conjure, io.posidon.Paper Info: runtime org.gnome.Platform branch 42 is end-of-life, with reason: The GNOME 42 runtime is no longer supported as of March 21, 2023. Please ask your application developer to migrate to a supported platform. Info: applications using this runtime: io.github.mmstick.FontFinder Info: runtime org.freedesktop.Sdk branch 21.08 is end-of-life, with reason: org.freedesktop.Platform 21.08 is no longer receiving fixes and security updates. Please update to a supported runtime version. Info: runtime org.freedesktop.Platform branch 21.08 is end-of-life, with reason: org.freedesktop.Platform 21.08 is no longer receiving fixes and security updates. Please update to a supported runtime version. Info: applications using this runtime: com.github.emmanueltouzery.projectpad, com.github.z.Cumulonimbus, io.github.kotatogram, io.lbry.lbry-app Info: runtime org.freedesktop.Platform branch 20.08 is end-of-life, with reason: org.freedesktop.Platform 20.08 is no longer receiving fixes and security updates. Please update to a supported runtime version. Info: applications using this runtime: org.seul.pingus Info: runtime org.freedesktop.Platform.ffmpeg-full branch 21.08 is end-of-life, with reason: org.freedesktop.Platform 21.08 is no longer receiving fixes and security updates. Please update to a supported runtime version. Info: applications using this extension: io.github.kotatogram Info: runtime org.freedesktop.Platform.GL.default branch 21.08 is end-of-life, with reason: org.freedesktop.Platform 21.08 is no longer receiving fixes and security updates. Please update to a supported runtime version. Info: applications using this extension: com.github.emmanueltouzery.projectpad, com.github.z.Cumulonimbus, io.github.kotatogram, io.lbry.lbry-app, io.github.mmstick.FontFinder Info: runtime org.freedesktop.Platform.GL.default branch 20.08 is end-of-life, with reason: org.freedesktop.Platform 20.08 is no longer receiving fixes and security updates. Please update to a supported runtime version. Info: applications using this extension: org.seul.pingus Info: app org.seul.pingus branch stable is end-of-life, with reason: This application is now being maintained as a Nix flake. Info: app io.lbry.lbry-app branch stable is end-of-life, with reason: This application is no longer maintained. Info: app com.microsoft.Teams branch stable is end-of-life, with reason: The Linux version of Microsoft Teams is no longer supported. It is recommnded to switch to PWA version, using Chrome, Chromium or Edge. See https://techcommunity.microsoft.com/t5/microsoft-teams-blog/microsoft-teams-progressive-web-app-now-available-on-linux/ba-p/3669846 for details. Nothing to do. DEBUG Step "Brew" DEBUG Detected "/home/linuxbrew/.linuxbrew/bin/brew" as "brew" ── 10:35:11 - Brew ───────────────────────────────────────────────────────────── DEBUG Executing command `brew update` ==> Updating Homebrew... Already up-to-date. DEBUG Executing command `brew upgrade --formula` ==> Auto-updating Homebrew... Adjust how often this is run with HOMEBREW_AUTO_UPDATE_SECS or disable with HOMEBREW_NO_AUTO_UPDATE. Hide these hints with HOMEBREW_NO_ENV_HINTS (see `man brew`). DEBUG Step "LURE" DEBUG Step "yadm" DEBUG Step "nix" DEBUG Step "nix upgrade-nix" DEBUG Step "guix" DEBUG Step "home-manager" DEBUG Step "asdf" DEBUG Step "pkgin" DEBUG Step "bun" DEBUG Step "bun-packages" DEBUG Step "zr" DEBUG Detected "/usr/bin/zsh" as "zsh" DEBUG Step "antibody" DEBUG Detected "/usr/bin/zsh" as "zsh" DEBUG Step "antidote" DEBUG Detected "/usr/bin/zsh" as "zsh" DEBUG Step "antigen" DEBUG Detected "/usr/bin/zsh" as "zsh" DEBUG Path "/home/sum/.zshrc" exists DEBUG Step "zgenom" DEBUG Detected "/usr/bin/zsh" as "zsh" DEBUG Path "/home/sum/.zshrc" exists DEBUG Step "zplug" DEBUG Detected "/usr/bin/zsh" as "zsh" DEBUG Path "/home/sum/.zshrc" exists DEBUG Step "zinit" DEBUG Detected "/usr/bin/zsh" as "zsh" DEBUG Path "/home/sum/.zshrc" exists DEBUG Step "zi" DEBUG Detected "/usr/bin/zsh" as "zsh" DEBUG Path "/home/sum/.zshrc" exists DEBUG Step "zim" DEBUG Detected "/usr/bin/zsh" as "zsh" DEBUG Executing command `zsh -c '[[ -n ${ZIM_HOME} ]] && print -n ${ZIM_HOME}'` DEBUG Command failed: Err( 0: Command failed: `zsh -c '[[ -n ${ZIM_HOME} ]] && print -n ${ZIM_HOME}'` 1: `zsh` failed: exit status: 1 Location: src/steps/zsh.rs:154) DEBUG Step "oh-my-zsh" DEBUG Detected "/usr/bin/zsh" as "zsh" DEBUG Path "/home/sum/.oh-my-zsh" exists ── 10:35:14 - oh-my-zsh ──────────────────────────────────────────────────────── DEBUG Executing command `zsh -c 'test $ZSH_CUSTOM && echo -n $ZSH_CUSTOM'` DEBUG Command failed: Err( 0: Command failed: `zsh -c 'test $ZSH_CUSTOM && echo -n $ZSH_CUSTOM'` 1: `zsh` failed: exit status: 1 Location: src/steps/zsh.rs:207) DEBUG Running zsh returned Command failed: `zsh -c 'test $ZSH_CUSTOM && echo -n $ZSH_CUSTOM'`. Using default path: /home/sum/.oh-my-zsh/custom DEBUG oh-my-zsh custom dir: /home/sum/.oh-my-zsh/custom DEBUG Checking if /home/sum/.oh-my-zsh/custom is a git repository DEBUG Executing command `/usr/bin/git rev-parse --show-toplevel` DEBUG Checking if /home/sum/.oh-my-zsh/custom/themes is a git repository DEBUG Executing command `/usr/bin/git rev-parse --show-toplevel` DEBUG /home/sum/.oh-my-zsh/custom/themes/example.zsh-theme is a file. Checking /home/sum/.oh-my-zsh/custom/themes DEBUG Checking if /home/sum/.oh-my-zsh/custom/themes is a git repository DEBUG Executing command `/usr/bin/git rev-parse --show-toplevel` DEBUG Checking if /home/sum/.oh-my-zsh/custom/plugins is a git repository DEBUG Executing command `/usr/bin/git rev-parse --show-toplevel` DEBUG Checking if /home/sum/.oh-my-zsh/custom/plugins/example is a git repository DEBUG Executing command `/usr/bin/git rev-parse --show-toplevel` DEBUG Checking if /home/sum/.oh-my-zsh/custom/plugins/zsh-autosuggestions is a git repository DEBUG Executing command `/usr/bin/git rev-parse --show-toplevel` DEBUG Checking if /home/sum/.oh-my-zsh/custom/plugins/zsh-syntax-highlighting is a git repository DEBUG Executing command `/usr/bin/git rev-parse --show-toplevel` DEBUG /home/sum/.oh-my-zsh/custom/example.zsh is a file. Checking /home/sum/.oh-my-zsh/custom DEBUG Checking if /home/sum/.oh-my-zsh/custom is a git repository DEBUG Executing command `/usr/bin/git rev-parse --show-toplevel` Pulling custom plugins and themes DEBUG Executing command `/usr/bin/git remote show` DEBUG Executing command `/usr/bin/git remote show` DEBUG Executing command `/usr/bin/git rev-parse HEAD` Pulling /home/sum/.oh-my-zsh/custom/plugins/zsh-syntax-highlighting DEBUG Executing command `/usr/bin/git rev-parse HEAD` Pulling /home/sum/.oh-my-zsh/custom/plugins/zsh-autosuggestions DEBUG Executing command `/usr/bin/git rev-parse HEAD` Up-to-date /home/sum/.oh-my-zsh/custom/plugins/zsh-autosuggestions DEBUG Executing command `/usr/bin/git rev-parse HEAD` Up-to-date /home/sum/.oh-my-zsh/custom/plugins/zsh-syntax-highlighting DEBUG Executing command `zsh /home/sum/.oh-my-zsh/tools/upgrade.sh` Updating Oh My Zsh __ __ ____ / /_ ____ ___ __ __ ____ _____/ /_ / __ \/ __ \ / __ `__ \/ / / / /_ / / ___/ __ \ / /_/ / / / / / / / / / / /_/ / / /_(__ ) / / / \____/_/ /_/ /_/ /_/ /_/\__, / /___/____/_/ /_/ /____/ Oh My Zsh is already at the latest version. To keep up with the latest news and updates, follow us on Twitter: @ohmyzsh Want to get involved in the community? Join our Discord: Discord server Get your Oh My Zsh swag at: Planet Argon Shop DEBUG Step "oh-my-bash" DEBUG Detected "/usr/bin/bash" as "bash" DEBUG Step "fisher" DEBUG Detected "/usr/bin/fish" as "fish" DEBUG Executing command `/usr/bin/fish -c 'type -t fisher'` DEBUG Command failed: Err( 0: Command failed: `/usr/bin/fish -c 'type -t fisher'` Stderr: type: Could not find 'fisher' 1: `/usr/bin/fish` failed: exit status: 1 Location: src/steps/os/unix.rs:99) DEBUG Step "bash-it" DEBUG Step "oh-my-fish" DEBUG Detected "/usr/bin/fish" as "fish" DEBUG Step "fish-plug" DEBUG Detected "/usr/bin/fish" as "fish" DEBUG Step "fundle" DEBUG Detected "/usr/bin/fish" as "fish" DEBUG Step "tmux" DEBUG Step "TLDR" DEBUG Detected "/usr/bin/tldr" as "tldr" ── 10:35:15 - TLDR ───────────────────────────────────────────────────────────── DEBUG Executing command `/usr/bin/tldr --update` Updated cache for 4906 entries DEBUG Step "pearl" DEBUG Step "Gnome Shell Extensions" DEBUG Detected "/usr/bin/gdbus" as "gdbus" DEBUG Step "SDKMAN!" DEBUG Detected "/usr/bin/bash" as "bash" DEBUG Step "rcm" DEBUG Step "maza" DEBUG Step "apm" DEBUG Step "fossil" DEBUG Step "rustup" DEBUG Step "juliaup" DEBUG Step ".NET" DEBUG Detected "/usr/bin/dotnet" as "dotnet" DEBUG Executing command `/usr/bin/dotnet tool list --global` DEBUG Step "choosenim" DEBUG Step "cargo" DEBUG Path "/home/sum/.cargo" exists DEBUG Detected "/usr/bin/cargo" as "cargo" DEBUG Path "/home/sum/.cargo/.crates.toml" exists ── 10:35:16 - Cargo ──────────────────────────────────────────────────────────── DEBUG Path "/home/sum/.cargo/bin/cargo-install-update" exists DEBUG Executing command `/home/sum/.cargo/bin/cargo-install-update install-update --git --all` Polling registry 'https://index.crates.io/'. Package Installed Latest Needs update cargo-update v13.4.0 v13.4.0 No No packages need updating. Package Installed Latest Needs update No git packages need updating. Overall updated 0 packages. DEBUG Step "Flutter" DEBUG Step "go-global-update" DEBUG Detected "/usr/bin/go" as "go" DEBUG Executing command `/usr/bin/go env GOPATH` DEBUG Step "gup" DEBUG Detected "/usr/bin/go" as "go" DEBUG Executing command `/usr/bin/go env GOPATH` DEBUG Step "Emacs" DEBUG Detected "/usr/bin/emacs" as "emacs" DEBUG Step "opam" DEBUG Step "vcpkg" DEBUG Detected "/usr/bin/vcpkg" as "vcpkg" ── 10:35:16 - vcpkg ──────────────────────────────────────────────────────────── DEBUG Executing command `/usr/bin/vcpkg upgrade --no-dry-run` All installed packages are up-to-date with the local portfile. DEBUG Step "pipx" DEBUG Detected "/usr/bin/pipx" as "pipx" ── 10:35:16 - pipx ───────────────────────────────────────────────────────────── DEBUG Executing command `pipx --version` DEBUG Executing command `/usr/bin/pipx upgrade-all --quiet` Versions did not change after running 'pipx upgrade' for each package 😴 DEBUG Step "Visual Studio Code extensions" DEBUG Executing command `uname -r` DEBUG Uname output: 6.7.7-1-MANJARO DEBUG Detected "/usr/bin/code" as "code" DEBUG Executing command `code --version` ── 10:35:16 - Visual Studio Code extensions ──────────────────────────────────── DEBUG Executing command `/usr/bin/code --update-extensions` No extension to update DEBUG Step "conda" DEBUG Step "mamba" DEBUG Step "miktex" DEBUG Step "pip3" DEBUG Detected "/usr/bin/python" as "python" DEBUG Executing command `/usr/bin/python -V` DEBUG Detected "/usr/bin/python3" as "python3" DEBUG Executing command `/usr/bin/python3 -V` DEBUG Executing command `/usr/bin/python -m pip` DEBUG Executing command `/usr/bin/python -c 'import sysconfig; from os import path; print('\''Y'\'') if path.isfile(path.join(sysconfig.get_path('\''stdlib'\''), '\''EXTERNALLY-MANAGED'\'')) else print('\''N'\'')'` DEBUG Executing command `/usr/bin/python -m pip config get global.break-system-packages` DEBUG Command failed: Err( 0: Command failed: `/usr/bin/python -m pip config get global.break-system-packages` Stderr: ERROR: No such key - global.break-system-packages 1: `/usr/bin/python` failed: exit status: 1 Location: src/steps/generic.rs:476) DEBUG pip3 externally managed: true DEBUG pip3 global.break-system-packages: false DEBUG Step "pip-review" DEBUG Step "pip-review (local)" DEBUG Step "pipupgrade" DEBUG Step "ghcup" DEBUG Step "stack" DEBUG Step "tlmgr" DEBUG Step "myrepos" DEBUG Step "chezmoi" DEBUG Step "jetpack" DEBUG Step "vim" DEBUG Detected "/usr/bin/vim" as "vim" DEBUG Executing command `/usr/bin/vim --version` DEBUG Step "Neovim" DEBUG Detected "/usr/bin/nvim" as "nvim" DEBUG Step "The Ultimate vimrc" DEBUG Step "voom" DEBUG Step "Kakoune" DEBUG Step "helix" DEBUG Step "npm" DEBUG Detected "/home/sum/.npm-global/bin/npm" as "npm" ── 10:35:18 - Node Package Manager ───────────────────────────────────────────── DEBUG Executing command `/home/sum/.npm-global/bin/npm --version` DEBUG Executing command `/home/sum/.npm-global/bin/npm root '--location=global'` DEBUG Executing command `/home/sum/.npm-global/bin/npm --version` DEBUG Executing command `/home/sum/.npm-global/bin/npm update '--location=global'` npm ERR! code EACCES npm ERR! syscall rename npm ERR! path /usr/bin/coffee npm ERR! dest /usr/bin/.coffee-7NiFGh3y npm ERR! errno -13 npm ERR! Error: EACCES: permission denied, rename '/usr/bin/coffee' -> '/usr/bin/.coffee-7NiFGh3y' npm ERR! [Error: EACCES: permission denied, rename '/usr/bin/coffee' -> '/usr/bin/.coffee-7NiFGh3y'] { npm ERR! errno: -13, npm ERR! code: 'EACCES', npm ERR! syscall: 'rename', npm ERR! path: '/usr/bin/coffee', npm ERR! dest: '/usr/bin/.coffee-7NiFGh3y' npm ERR! } npm ERR! npm ERR! The operation was rejected by your operating system. npm ERR! It is likely you do not have the permissions to access this file as the current user npm ERR! npm ERR! If you believe this might be a permissions issue, please double-check the npm ERR! permissions of the file and its containing directories, or try running npm ERR! the command again as root/Administrator. npm ERR! A complete log of this run can be found in: /home/sum/.npm/_logs/2024-04-02T08_35_19_696Z-debug-0.log DEBUG Command failed: Err( 0: Command failed: `/home/sum/.npm-global/bin/npm update '--location=global'` 1: `/home/sum/.npm-global/bin/npm` failed: exit status: 243 Location: src/steps/node.rs:102) DEBUG Step "npm" failed: 0: Command failed: `/home/sum/.npm-global/bin/npm update '--location=global'` 1: `/home/sum/.npm-global/bin/npm` failed: exit status: 243 Location: src/steps/node.rs:102 npm failed: 0: Command failed: `/home/sum/.npm-global/bin/npm update '--location=global'` 1: `/home/sum/.npm-global/bin/npm` failed: exit status: 243 Location: src/steps/node.rs:102 Retry? (y)es/(N)o/(s)hell/(q)uit DEBUG Step "yarn" DEBUG Detected "/home/sum/.local/share/pnpm/yarn" as "yarn" DEBUG Detected "/home/sum/.local/share/pnpm/yarn" as "yarn" DEBUG Executing command `/home/sum/.local/share/pnpm/yarn --version` ── 10:35:26 - Yarn Package Manager ───────────────────────────────────────────── DEBUG Executing command `/home/sum/.local/share/pnpm/yarn global dir` DEBUG Executing command `/home/sum/.local/share/pnpm/yarn global upgrade` yarn global v1.22.22 [1/4] Resolving packages... [2/4] Fetching packages... [3/4] Linking dependencies... [4/4] Rebuilding all packages... success Saved lockfile. success Saved 0 new dependencies. Done in 0.03s. DEBUG Step "pnpm" DEBUG Detected "/usr/bin/pnpm" as "pnpm" ── 10:35:26 - Performant Node Package Manager ────────────────────────────────── DEBUG Executing command `/usr/bin/pnpm --version` DEBUG Executing command `/usr/bin/pnpm root -g` DEBUG Executing command `/usr/bin/pnpm --version` DEBUG Executing command `/usr/bin/pnpm update -g` Already up to date Progress: resolved 1, reused 0, downloaded 0, added 0, done Done in 485ms DEBUG Step "Containers" DEBUG Detected "/usr/bin/podman" as "podman" DEBUG Using container runtime '/usr/bin/podman' ── 10:35:28 - Containers ─────────────────────────────────────────────────────── DEBUG Querying '/usr/bin/podman image ls --format "{{.Repository}}:{{.Tag}}/{{.ID}}"' for containers DEBUG Executing command `/usr/bin/podman image ls --format '{{.Repository}}:{{.Tag}} {{.ID}}'` DEBUG Containers to inspect: [] DEBUG Step "deno" DEBUG Step "composer" DEBUG Step "krew" DEBUG Step "helm" DEBUG Step "gem" DEBUG Detected "/home/sum/.rbenv/shims/gem" as "gem" DEBUG Step "rubygems" DEBUG Step "julia" DEBUG Step "haxelib" DEBUG Step "sheldon" DEBUG Step "stew" DEBUG Step "rtcl" DEBUG Step "bin" DEBUG Step "gcloud" DEBUG Step "micro" DEBUG Detected "/usr/bin/micro" as "micro" ── 10:35:28 - micro ──────────────────────────────────────────────────────────── DEBUG Executing command `/usr/bin/micro -plugin update` Checking for plugin updates Nothing to install / update DEBUG Step "raco" DEBUG Step "spicetify" DEBUG Step "GitHub CLI Extensions" DEBUG Detected "/usr/bin/gh" as "gh" DEBUG Executing command `/usr/bin/gh extensions list` ── 10:35:28 - GitHub CLI Extensions ──────────────────────────────────────────── DEBUG Executing command `/usr/bin/gh extension upgrade --all` no installed extensions found DEBUG Step "Bob" DEBUG Checking if /home/sum/.emacs.d is a git repository DEBUG Executing command `/usr/bin/git rev-parse --show-toplevel` DEBUG Command failed: Err( 0: Command failed: `/usr/bin/git rev-parse --show-toplevel` Stderr: fatal: not a git repository (or any parent up to mount point /) Stopping at filesystem boundary (GIT_DISCOVERY_ACROSS_FILESYSTEM not set). 1: `/usr/bin/git` failed: exit status: 128 Location: src/steps/git.rs:170) DEBUG /home/sum/.doom.d does not exist DEBUG /home/sum/.vim does not exist DEBUG /home/sum/.config/nvim does not exist DEBUG /home/sum/.ideavimrc does not exist DEBUG /home/sum/.intellimacs does not exist DEBUG /home/sum/.dotfiles does not exist DEBUG /home/sum/code/nam1962/dotfiles/zshrc is a file. Checking /home/sum/code/nam1962/dotfiles DEBUG Checking if /home/sum/code/nam1962/dotfiles is a git repository DEBUG Executing command `/usr/bin/git rev-parse --show-toplevel` DEBUG /home/sum/.tmux does not exist DEBUG Checking if /home/sum/.config/fish is a git repository DEBUG Executing command `/usr/bin/git rev-parse --show-toplevel` DEBUG Command failed: Err( 0: Command failed: `/usr/bin/git rev-parse --show-toplevel` Stderr: fatal: not a git repository (or any parent up to mount point /) Stopping at filesystem boundary (GIT_DISCOVERY_ACROSS_FILESYSTEM not set). 1: `/usr/bin/git` failed: exit status: 128 Location: src/steps/git.rs:170) DEBUG /home/sum/.config/openbox does not exist DEBUG /home/sum/.config/bspwm does not exist DEBUG /home/sum/.config/i3 does not exist DEBUG /home/sum/.config/sway does not exist DEBUG Step "Git repositories" ── 10:35:28 - Git repositories ───────────────────────────────────────────────── DEBUG Executing command `/usr/bin/git remote show` DEBUG Executing command `/usr/bin/git rev-parse HEAD` Pulling /home/sum/code/nam1962/dotfiles DEBUG Executing command `/usr/bin/git rev-parse HEAD` Up-to-date /home/sum/code/nam1962/dotfiles DEBUG Step "Vagrant boxes" ── 10:35:29 - Summary ────────────────────────────────────────────────────────── Self Update: OK packer.nu: SKIPPED: Cannot find "nu" in PATH System update: OK config-update: OK am: SKIPPED: Cannot find "am" in PATH appman: SKIPPED: Cannot find "appman" in PATH deb-get: SKIPPED: Cannot find "deb-get" in PATH toolbx: SKIPPED: Cannot find "toolbox" in PATH snap: SKIPPED: Cannot find "snap" in PATH pacstall: SKIPPED: Cannot find "pacstall" in PATH pacdef: SKIPPED: Cannot find "pacdef" in PATH protonup: SKIPPED: Cannot find "protonup" in PATH distrobox: OK dkp-pacman: SKIPPED: Cannot find "dkp-pacman" in PATH pihole: SKIPPED: Cannot find "pihole" in PATH Firmware upgrades: SKIPPED: Cannot find "fwupdmgr" in PATH Restarts: SKIPPED: Cannot find "needrestart" in PATH Flatpak: OK Brew: OK LURE: SKIPPED: Cannot find "lure" in PATH yadm: SKIPPED: Cannot find "yadm" in PATH nix: SKIPPED: Cannot find "nix" in PATH nix upgrade-nix: SKIPPED: Cannot find "nix" in PATH guix: SKIPPED: Cannot find "guix" in PATH home-manager: SKIPPED: Cannot find "home-manager" in PATH asdf: SKIPPED: Cannot find "asdf" in PATH pkgin: SKIPPED: Cannot find "pkgin" in PATH bun: SKIPPED: Cannot find "bun" in PATH bun-packages: SKIPPED: Cannot find "bun" in PATH zr: SKIPPED: Cannot find "zr" in PATH antibody: SKIPPED: Cannot find "antibody" in PATH antidote: SKIPPED: Path "/home/sum/.antidote" doesn't exist antigen: SKIPPED: Path "/home/sum/antigen.zsh" doesn't exist zgenom: SKIPPED: Path "/home/sum/.zgenom" doesn't exist zplug: SKIPPED: Path "/home/sum/.zplug" doesn't exist zinit: SKIPPED: Path "/home/sum/.zinit" doesn't exist zi: SKIPPED: Path "/home/sum/.zi" doesn't exist zim: SKIPPED: Path "/home/sum/.zim" doesn't exist oh-my-zsh: OK oh-my-bash: SKIPPED: Path "/home/sum/.oh-my-bash" doesn't exist fisher: SKIPPED: `fisher` is not defined in `fish` bash-it: SKIPPED: Path "/home/sum/.bash_it" doesn't exist oh-my-fish: SKIPPED: Path "/home/sum/.local/share/omf/pkg/omf/functions/omf.fish" doesn't exist fish-plug: SKIPPED: Path "/home/sum/.local/share/fish/plug/kidonng/fish-plug/functions/plug.fish" doesn't exist fundle: SKIPPED: Path "/home/sum/.config/fish/fundle" doesn't exist tmux: SKIPPED: Path "/home/sum/.tmux/plugins/tpm/bin/update_plugins" doesn't exist TLDR: OK pearl: SKIPPED: Cannot find "pearl" in PATH Gnome Shell Extensions: SKIPPED: Desktop doest not appear to be gnome SDKMAN!: SKIPPED: Path "/home/sum/.sdkman/bin/sdkman-init.sh" doesn't exist rcm: SKIPPED: Cannot find "rcup" in PATH maza: SKIPPED: Cannot find "maza" in PATH apm: SKIPPED: Cannot find "apm" in PATH fossil: SKIPPED: Cannot find "fossil" in PATH rustup: SKIPPED: Cannot find "rustup" in PATH juliaup: SKIPPED: Cannot find "juliaup" in PATH .NET: SKIPPED: No dotnet global tools installed choosenim: SKIPPED: Cannot find "choosenim" in PATH cargo: OK Flutter: SKIPPED: Cannot find "flutter" in PATH go-global-update: SKIPPED: Path "/home/sum/go/bin/go-global-update" doesn't exist gup: SKIPPED: Path "/home/sum/go/bin/gup" doesn't exist Emacs: SKIPPED: Path "/home/sum/.emacs.d/init.el" doesn't exist opam: SKIPPED: Cannot find "opam" in PATH vcpkg: OK pipx: OK Visual Studio Code extensions: OK conda: SKIPPED: Cannot find "conda" in PATH mamba: SKIPPED: Cannot find "mamba" in PATH miktex: SKIPPED: Cannot find "miktex" in PATH pip3: SKIPPED: Skip pip3 update as it is externally managed and global.break-system-packages is not true pip-review: SKIPPED: Cannot find "pip-review" in PATH pip-review (local): SKIPPED: Cannot find "pip-review" in PATH pipupgrade: SKIPPED: Cannot find "pipupgrade" in PATH ghcup: SKIPPED: Cannot find "ghcup" in PATH stack: SKIPPED: Cannot find "stack" in PATH tlmgr: SKIPPED: tlmgr must be explicity enabled in the configuration to run in Android/Linux myrepos: SKIPPED: Cannot find "mr" in PATH chezmoi: SKIPPED: Cannot find "chezmoi" in PATH jetpack: SKIPPED: Cannot find "jetpack" in PATH vim: SKIPPED: Path "/home/sum/.vim/vimrc" doesn't exist Neovim: SKIPPED: Path "/home/sum/.config/nvim/init.lua" doesn't exist The Ultimate vimrc: SKIPPED: Path "/home/sum/.vim_runtime" doesn't exist voom: SKIPPED: Cannot find "voom" in PATH Kakoune: SKIPPED: Cannot find "kak" in PATH helix: SKIPPED: Cannot find "helix" in PATH npm: FAILED yarn: OK pnpm: OK Containers: OK deno: SKIPPED: Cannot find "deno" in PATH composer: SKIPPED: Cannot find "composer" in PATH krew: SKIPPED: Cannot find "kubectl-krew" in PATH helm: SKIPPED: Cannot find "helm" in PATH gem: SKIPPED: Path "/home/sum/.gem" doesn't exist rubygems: SKIPPED: Path "/home/sum/.gem" doesn't exist julia: SKIPPED: Cannot find "julia" in PATH haxelib: SKIPPED: Cannot find "haxelib" in PATH sheldon: SKIPPED: Cannot find "sheldon" in PATH stew: SKIPPED: Cannot find "stew" in PATH rtcl: SKIPPED: Cannot find "rupdate" in PATH bin: SKIPPED: Cannot find "bin" in PATH gcloud: SKIPPED: Cannot find "gcloud" in PATH micro: OK raco: SKIPPED: Cannot find "raco" in PATH spicetify: SKIPPED: Cannot find "spicetify-cli" in PATH GitHub CLI Extensions: OK Bob: SKIPPED: Cannot find "bob" in PATH Git repositories: OK Vagrant boxes: SKIPPED: Cannot find "vagrant" in PATH Pacman backup configuration files found: /etc/passwd.pacnew /etc/locale.gen.pacnew /etc/pacman.conf.pacnew /etc/lightdm/lightdm-gtk-greeter.conf.pacnew DEBUG Desktop notification: Topgrade finished with errors INFO perform: new INFO perform:write_command{command=Auth(Some(External), Some([49, 48, 48, 48]))}: new INFO perform:write_command{command=Auth(Some(External), Some([49, 48, 48, 48]))}: close INFO perform:read_command: new INFO perform:read_command: close INFO perform:write_command{command=NegotiateUnixFD}: new INFO perform:write_command{command=NegotiateUnixFD}: close INFO perform:read_command: new INFO perform:read_command: close INFO perform:write_command{command=Begin}: new INFO perform:write_command{command=Begin}: close INFO perform: close INFO socket reader: new INFO socket reader: close ➜ .oh-my-zsh git:(master)