Open krdav opened 1 year ago
Update:
Instead of showing only top scoring sequences, I changed it such that it allows showing multiple levels e.g.
show_best=1
shows sequences with the highest score
show_best=2
shows sequences with the highest and second highest score
etc
Thanks for the suggested change to swipe. I haven't worked on the swipe code for a long time, but will try to find time to look at this soon.
Thank you so much! I understand if you got other priorities, not working on the swipe code. But Swipe just happen to be very fast - in my experience a lot faster than other SW tools/libraries.
Clunky way of solving the request that I wrote about in this issue: https://github.com/torognes/swipe/issues/37
Not suggesting this as the actual solution, but rather showing it so that it is clear what I am referring to in the issue. In a better solution the
show_best
option should probably be a boolean or yes/no and there is probably a more intelligent way of implementing it such thatshowhits
andshowalignments
are not forced to be the same.