search

torognes / swipe

Smith-Waterman database searches with inter-sequence SIMD parallelisation
GNU Affero General Public License v3.0
58 stars 21 forks source link

Search with a query sequence profile #5

Open torognes opened 11 years ago

torognes commented 11 years ago

Add an option to search with a query profile (pwm or pssm derived from an msa) instead of a single sequence, somewhat similar to psi-blast.