Open givdieri opened 1 month ago
command: $ vsearch --db UNITE10.fasta --sintax refs.fasta --tabbedout refs_sintaxonomy.tsv --sintax_cutoff 0.8 --sintax_random vsearch v2.28.1_linux_x86_64, 251.2GB RAM, 96 cores
produces this output for the first 5 sequences (these are not closely related):
<html xmlns:o="urn:schemas-microsoft-com:office:office" xmlns:x="urn:schemas-microsoft-com:office:excel" xmlns="http://www.w3.org/TR/REC-html40">
command: $ vsearch --db UNITE10.fasta --sintax refs.fasta --tabbedout refs_sintaxonomy.tsv --sintax_cutoff 0.8 --sintax_random vsearch v2.28.1_linux_x86_64, 251.2GB RAM, 96 cores
produces this output for the first 5 sequences (these are not closely related):
<html xmlns:o="urn:schemas-microsoft-com:office:office" xmlns:x="urn:schemas-microsoft-com:office:excel" xmlns="http://www.w3.org/TR/REC-html40">
Laccaria amethystina ITS | d:Fungi(1.00),p:Basidiomycota(0.79),c:Agaricomycetes(0.78),o:Boletales(0.73),f:Paxillaceae(0.73),g:Melanogaster(0.73),s:SH0000009.10FU(0.73) -- | -- Tomentella sublilacina ITS | d:Fungi(1.00),p:Basidiomycota(0.74),c:Agaricomycetes(0.74),o:Boletales(0.48),f:Paxillaceae(0.48),g:Melanogaster(0.48),s:SH0000009.10FU(0.48) Inocybe napipes ITS | d:Fungi(1.00),p:Basidiomycota(0.90),c:Agaricomycetes(0.90),o:Boletales(0.77),f:Paxillaceae(0.77),g:Melanogaster(0.77),s:SH0000009.10FU(0.77) Lactarius subdulcis ITS | d:Fungi(1.00),p:Ascomycota(0.44),c:Agaricomycetes(0.37),o:Saccharomycetales(0.16),f:Paxillaceae(0.15),g:Melanogaster(0.15),s:SH0000009.10FU(0.15) Russula ochroleuca ITS | d:Fungi(1.00),p:Basidiomycota(0.46),c:Agaricomycetes(0.44),o:Boletales(0.33),f:Paxillaceae(0.33),g:Melanogaster(0.33),s:SH0000009.10FU(0.33)