The parameter optimization now includes the ISBI SPT challenge metrics.

trackmate-sc / TrackMate-CTCRunner

Batch measurements of the Cell-Tracking-Challenge metrics using TrackMate.

GNU Affero General Public License v3.0

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The parameter optimization now includes the ISBI SPT challenge metrics. #4

Closed tinevez closed 2 years ago

tinevez commented 2 years ago

I adapted and copied code from by N. Chenouard, F. De Chaumont and S. Dallongeville so that it can run in batch and without Icy. Also this version does the metrics computation without saving the tracking data on the hard-drive, which makes it very fast compared to the CTC metrics.