In commit https://github.com/traitecoevo/APCalign/commit/8aabbc865da6efc86f9db67394b40f0fb72c32e5 there was an error introduced to all matches where an ifelse() statement was included to created the aligned_name. I think this occurred because the two identifier strings created (identifier_string and identifier_string2) were fixed values, rather than columns within taxa$tocheck and therefore, for other values (e.g. canonicalName) being included in the pasted together strings for aligned name were always the first values from, for instance, resources$genera_all2$canonicalName[ii], rather than the appropriate line of resources$genera_all2$canonicalName[ii].
ehwenk
commented
1 year ago
In commit https://github.com/traitecoevo/APCalign/commit/8aabbc865da6efc86f9db67394b40f0fb72c32e5 there was an error introduced to all matches where an ifelse() statement was included to created the
aligned_name. I think this occurred because the two identifier strings created (identifier_stringandidentifier_string2) were fixed values, rather than columns withintaxa$tocheckand therefore, for other values (e.g. canonicalName) being included in the pasted together strings for aligned name were always the first values from, for instance,resources$genera_all2$canonicalName[ii], rather than the appropriate line ofresources$genera_all2$canonicalName[ii].