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traitecoevo / APCalign

R package for accessing, matching and updating species names of Australian flora
https://traitecoevo.github.io/APCalign/
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Native edge cases #144

Closed wcornwell closed 1 year ago

wcornwell commented 1 year ago

better handling edge cases (including hyphens in species names). current behavior:

  1. Warns if not binomial
  2. Tries to match at the binomial level
  3. Returns "unknown" for genera and/or families
fontikar commented 1 year ago

I am wondering if we should modify native_in_australia so its like update_taxonomy and accepts the a DF of aligned names??

wcornwell commented 1 year ago

Or a DF of updated_names since it won't really work with anything that's not APC accepted anyway?

wcornwell commented 1 year ago

current way to use the function with create_taxonomic_update_lookup:

Screenshot 2023-09-07 at 12 37 20 pm
fontikar commented 1 year ago

Or a DF of updated_names since it won't really work with anything that's not APC accepted anyway?

I really like this idea, links with not APC stuff better!!!