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traitecoevo / taxonlookup

A versioned and dynamically updating taxonomic lookup table for land plants
http://onlinelibrary.wiley.com/doi/10.1111/2041-210X.12517/abstract
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plant_lookup.csv should not be committed #26

Open richfitz opened 8 years ago

richfitz commented 8 years ago

The big lookup table should be removed and added to .gitignore so that package installation is light. @wcornwell; I see you added it - was this in error, or is there some use case that needs it?

wcornwell commented 8 years ago

At the moment we need it there to get the automatic DOI thing from zenodo to have the right information. see here. At the moment they only pull in things that are in the repository, not "binary" files in the release so if we take the csv out of the repo, it doesn't make it into the zenodo system.

For this particular project, this is a problem because the websites might change so rerunning the assembly script doesn't guarantee that the csv is identical. I did ask zenodo about this, but couldn't come up with a better solution. Any ideas?

wcornwell commented 7 years ago

this is waiting on https://github.com/zenodo/zenodo/issues/1235