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trakem2 / TrakEM2

ImageJ plugin for morphological data mining, 3D modeling and image stitching, registration, editing and annotation.
https://imagej.net/TrakEM2
GNU General Public License v3.0
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CATMAID export uses rounded z position of layers as index #24

Open axtimwalde opened 6 years ago

axtimwalde commented 6 years ago

which makes it impossible to export stacks with fractional z-spacing. @acardona, comments?

acardona commented 6 years ago

TrakEM2's quirks have become features users rely on.

To export in some other way, a new menu item for exporting could be added (leaving old menu item with old behavior intact), or just use scripting.

The comprehensive approach would be to write a new TrakEM2-like program that captures all modern usage. Alas, it seems nobody wants to invest on that.

On Oct 15, 2018, at 6:56 PM, Stephan Saalfeld notifications@github.com wrote:

which makes it impossible to export stacks with fractional z-spacing. @acardona, comments?

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