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trev-f / SRAlign

a flexible pipeline for short read alignment to a reference
MIT License
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Move to a separate workflow script #1

Closed trev-f closed 2 years ago

trev-f commented 2 years ago

https://github.com/trev-f/sralign/blob/53c498196c31591ca3d3d96de79fd56fc0e4ff05/main.nf#L42-L101

Abstract all of this away to its own workflow script to keep main.nf cleaner and to keep all pipeline code in its own place.