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trias-project / risk-modelling-and-mapping

🌍 Alien species risk modelling and mapping
MIT License
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Add input data #3

Open damianooldoni opened 4 years ago

damianooldoni commented 4 years ago

This issue comes from @amyjsdavis 's reply, https://github.com/trias-project/risk-modelling-and-mapping/issues/1#issuecomment-533103595. Indeed, big files cannot be set in GitHub.

  1. If data are already published on internet, a link to the source is sufficient.
  2. If data are not yet published, they need to be published. You can publish them via Zenodo with label dataset and open access. In this way you can document, archive and, most of all, cite them! Example: https://zenodo.org/record/1288628.
  3. If data cannot be published due to copyright restrictions, then a solution should be found during the Core Group meeting.

You can always ask @peterdesmet or me for advices.

qgroom commented 4 years ago

Meise has a lot of experience in pushing large volumes of large files to Zenodo through their API. If this needs to be done then we can either advise or do it.

amyjsdavis commented 4 years ago

Ok, for datasources that we create, I will push them to Zenodo. Thanks!

damianooldoni commented 4 years ago

Hi @amyjsdavis. Thanks for adding workflow to README. Next step, I think, is adding input data ( or link to get them) to the repo. I have just added link to European data cube. Could you please do the same with other data sources? For example, you mention KMI and CHELSA data. How can I or somebody else trying to reproduce our workflow get these data?

amyjsdavis commented 4 years ago

Hi @damianooldoni I will add these in the near future, but the work flow right I provided is just high level. I thought that was all you needed for now. It is not meant to be reproducible yet, or for anyone to actually use. There are steps, code and commenting missing, as well as some model selection issues that I am working on. It is the best I can do for now, but more to come in a week or so.

amyjsdavis commented 4 years ago

In addition, the RMI data has not been released yet.

damianooldoni commented 4 years ago

Thanks @amyjsdavis. I don't need more details for meeting tomorrow, that's not the reason I wrote here today, no worries :relaxed: . I was just going through open issues. I thought this issue could be tackled easily as it involves input data, not modelling or producing outputs.

Still, let us know if you need help publishing input data on Zenodo or for any other kind of help :+1: