trichelab / spiky

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vignette not rendering, failing to download package #17

Open swils6 opened 3 years ago

swils6 commented 3 years ago

Here is the error I get when I try to download spiky and dependencies.

E creating vignettes (39s) --- re-building ‘spiky_vignette.Rmd’ using rmarkdown Warning in engine$weave(file, quiet = quiet, encoding = enc) : Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1. Quitting from lines 122-127 (spiky_vignette.Rmd) Error: processing vignette 'spiky_vignette.Rmd' failed with diagnostics: object 'assembly' not found --- failed re-building ‘spiky_vignette.Rmd’

SUMMARY: processing the following file failed: ‘spiky_vignette.Rmd’

Error: Vignette re-building failed. Execution halted Error: Failed to install 'spiky' from GitHub: System command 'R' failed, exit status: 1, stdout + stderr (last 10 lines): E> Quitting from lines 122-127 (spiky_vignette.Rmd) E> Error: processing vignette 'spiky_vignette.Rmd' failed with diagnostics: E> object 'assembly' not found E> --- failed re-building ‘spiky_vignette.Rmd’ E> E> SUMMARY: processing the following file failed: E> ‘spiky_vignette.Rmd’ E> E> Error: Vignette re-building failed. E> Execution halted