version of python - Githubissues

trislaz / gigassl

Repository for the Giga-SSL paper

MIT License

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version of python #2

Closed kwignb closed 1 year ago

kwignb commented 1 year ago

Hi, thanks for sharing the great works!

Could you please tell me what version of python you are using?

trislaz commented 1 year ago

Hello, sure, i'm using python 3.9.12 ! But the code has been tested with python 3.8 too

kwignb commented 1 year ago

Thank you for your reply! I ran conda install --yes --file requirements.txt with Python 3.9.12 as you mentioned and received the message that the following packages are not available.

kornia==0.6.4
tensorboardx==2.5.1
torch==1.11.0
openslide_python==1.1.2
scikit_image==0.19.2
torchvision==0.12.0
skimage==0.0
staintools==2.1.2
scikit_learn==1.2.0

Could you please let me know if there is something wrong?

trislaz commented 1 year ago

Thank you for pointing out this malfunction ! I pushed the new requirement file, I tested it on several devices and it seems to work. Can you please try to run this: conda env create -f requirements.yml && conda activate gigassl At the root directory of your repo (after pulling it) ?