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trislaz / wsi_mil

MIT License
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seek_best_tiles cannot work #4

Closed cellimnet closed 1 year ago

cellimnet commented 1 year ago

Hello: When running the seek_best_tiles.py, i get a error """assert self.store_score[o], "no tile found" AssertionError: no tile found""", i have followed the latest correction in "coquille" update for pkg/wsi_mil/visualizer/dissector.py and pkg/wsi_mil/visualizer/model_hooker.py, but i still get this error. Thank you for your answering!

trislaz commented 1 year ago

Hello, Are you using --consensus ? I would recommend always use it. I've modified the code to prevent this issue from reoccurring. However, encountering such an error might suggest that the models you're interpreting could be underfitted or overfitted. Please make sure the balanced metrics are good enough before placing complete faith in the interpretations!

cellimnet commented 1 year ago

Yes, i used --consensus, i'll check the performance of the models. Thanks for your answer!