HTTPError: HTTP Error 404: Not Found (For TCGA)

When trying to call the TCGA dataset with :

import torchmeta import requests from torchmeta.datasets.tcga import TCGA torchmeta.datasets.TCGA("data", meta_train=True, meta_val=False, meta_test=False, meta_split=None, min_samples_per_class=5, transform=None, target_transform=None, dataset_transform=None, download=True, chunksize=100, preload=True)

The program fails with:

Downloading ACC_clinicalMatrix.gz...

HTTPError Traceback (most recent call last)

in () 5 meta_test=False, meta_split=None, min_samples_per_class=5, transform=None, 6 target_transform=None, dataset_transform=None, download=True, ----> 7 chunksize=100, preload=True) /usr/local/lib/python3.6/dist-packages/torchmeta/datasets/tcga.py in __init__(self, root, meta_train, meta_val, meta_test, meta_split, min_samples_per_class, transform, target_transform, dataset_transform, download, chunksize, preload) 112 113 if download: --> 114 self.download(chunksize) 115 116 self.preloaded = False /usr/local/lib/python3.6/dist-packages/torchmeta/datasets/tcga.py in download(self, chunksize) 275 print('Downloading `{0}.gz`...'.format(filename)) 276 url = self.clinical_matrix_url.format(cancer) --> 277 urllib.request.urlretrieve(url, rawpath) 278 279 print('Extracting `{0}.gz`...'.format(filename)) /usr/lib/python3.6/urllib/request.py in urlretrieve(url, filename, reporthook, data) 246 url_type, path = splittype(url) 247 --> 248 with contextlib.closing(urlopen(url, data)) as fp: 249 headers = fp.info() 250 /usr/lib/python3.6/urllib/request.py in urlopen(url, data, timeout, cafile, capath, cadefault, context) 221 else: 222 opener = _opener --> 223 return opener.open(url, data, timeout) 224 225 def install_opener(opener): /usr/lib/python3.6/urllib/request.py in open(self, fullurl, data, timeout) 530 for processor in self.process_response.get(protocol, []): 531 meth = getattr(processor, meth_name) --> 532 response = meth(req, response) 533 534 return response /usr/lib/python3.6/urllib/request.py in http_response(self, request, response) 640 if not (200 <= code < 300): 641 response = self.parent.error( --> 642 'http', request, response, code, msg, hdrs) 643 644 return response /usr/lib/python3.6/urllib/request.py in error(self, proto, *args) 568 if http_err: 569 args = (dict, 'default', 'http_error_default') + orig_args --> 570 return self._call_chain(*args) 571 572 # XXX probably also want an abstract factory that knows when it makes /usr/lib/python3.6/urllib/request.py in _call_chain(self, chain, kind, meth_name, *args) 502 for handler in handlers: 503 func = getattr(handler, meth_name) --> 504 result = func(*args) 505 if result is not None: 506 return result /usr/lib/python3.6/urllib/request.py in http_error_default(self, req, fp, code, msg, hdrs) 648 class HTTPDefaultErrorHandler(BaseHandler): 649 def http_error_default(self, req, fp, code, msg, hdrs): --> 650 raise HTTPError(req.full_url, code, msg, hdrs, fp) 651 652 class HTTPRedirectHandler(BaseHandler): HTTPError: HTTP Error 404: Not Found

tristandeleu / pytorch-meta

HTTPError: HTTP Error 404: Not Found (For TCGA) #37