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tseemann / abricate

:mag_right: :pill: Mass screening of contigs for antimicrobial and virulence genes
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VFDB don't give subtype for stx genes even though the information is in the database files. #155

Open dnbenso opened 3 years ago

dnbenso commented 3 years ago

stx1A:1:AB050958:d from virulence_ecoli.fsa - this is stx1Ad verses stx1:21:AB050958:21 from stx.fsa

Database URL seems to have moved to different domain as well. https://cge.cbs.dtu.dk/services/VirulenceFinder/ https://bitbucket.org/genomicepidemiology/virulencefinder_db/src/master/ verses: http://www.mgc.ac.cn/VFs/