I've encountered an error when trying to update the refinder database. The error I get is that there are duplicate seq ids that are found. Below is from the log file
Building a new DB, current time: 11/07/2022 11:22:49
New DB name: /Users/nosi/opt/anaconda3/envs/abricate/db/resfinder/sequences
New DB title: resfinder
Sequence type: Nucleotide
Keep MBits: T
Maximum file size: 1000000000B
Hi :)
I've encountered an error when trying to update the refinder database. The error I get is that there are duplicate seq ids that are found. Below is from the log file
Building a new DB, current time: 11/07/2022 11:22:49 New DB name: /Users/nosi/opt/anaconda3/envs/abricate/db/resfinder/sequences New DB title: resfinder Sequence type: Nucleotide Keep MBits: T Maximum file size: 1000000000B
volume: /Users/nosi/opt/anaconda3/envs/abricate/db/resfinder/sequences
file: /Users/nosi/opt/anaconda3/envs/abricate/db/resfinder/sequences.nin file: /Users/nosi/opt/anaconda3/envs/abricate/db/resfinder/sequences.nhr file: /Users/nosi/opt/anaconda3/envs/abricate/db/resfinder/sequences.nsq file: /Users/nosi/opt/anaconda3/envs/abricate/db/resfinder/sequences.nsi file: /Users/nosi/opt/anaconda3/envs/abricate/db/resfinder/sequences.nsd file: /Users/nosi/opt/anaconda3/envs/abricate/db/resfinder/sequences.nhi file: /Users/nosi/opt/anaconda3/envs/abricate/db/resfinder/sequences.nhd file: /Users/nosi/opt/anaconda3/envs/abricate/db/resfinder/sequences.nog
BLAST Database creation error: Error: Duplicate seqids are found: LCL|RESFINDER~~~~~~