SimranKushwaha
commented
1 year ago Hi You can create a new conda environment for Abricate and try installing the tool in the particular environment.
Open mmimahh opened 1 year ago
SimranKushwaha
commented
1 year ago Hi You can create a new conda environment for Abricate and try installing the tool in the particular environment.
I got the output below after using the $ conda update --all command. please how do i fix this UnsatisfiableError: The following specifications were found to be incompatible with each other:
Output in format: Requested package -> Available versions
Package openssl conflicts for: htslib -> libcurl[version='>=7.83.1,<8.0a0'] -> openssl[version='1.0.*|>=1.0.2o,<1.0.3a|>=1.0.2p,<1.0.3a|>=1.1.1b,<1.1.2a|>=1.1.1c,<1.1.2a|>=1.1.1d,<1.1.2a|>=1.1.1f,<1.1.2a|>=1.1.1o,<1.1.2a|>=1.1.1s,<1.1.2a|>=3.0.7,<4.0a0|>=3.0.5,<4.0a0|>=3.0.3,<4.0a0|>=3.0.2,<4.0a0|>=3.0.0,<4.0a0|>=1.0.2m,<1.0.3a|>=1.0.2n,<1.0.3a'] htslib -> openssl[version='>=1.1.1a,<1.1.2a|>=1.1.1g,<1.1.2a|>=1.1.1h,<1.1.2a|>=1.1.1i,<1.1.2a|>=1.1.1j,<1.1.2a|>=1.1.1k,<1.1.2a|>=1.1.1l,<1.1.2a|>=1.1.1n,<1.1.2a|>=1.1.1q,<1.1.2a']
Package zlib conflicts for: htslib -> libcurl[version='>=7.83.1,<8.0a0'] -> zlib[version='1.2.*|1.2.11|>=1.2.13,<1.3.0a0'] htslib -> zlib[version='>=1.2.11,<1.3.0a0|>=1.2.12,<1.3.0a0']
Package ncurses conflicts for: python=3.9 -> ncurses[version='>=6.2,<7.0.0a0|>=6.3,<7.0a0|>=6.2,<7.0a0'] conda[version='>=23.1.0'] -> python[version='>=3.9,<3.10.0a0'] -> ncurses[version='>=6.1,<7.0.0a0|>=6.2,<6.3.0a0|>=6.2,<7.0.0a0|>=6.3,<7.0a0|>=6.2,<7.0a0|>=6.1,<7.0a0'] samtools -> ncurses[version='5.9|5.9.*|>=5.9,<5.10.0a0|>=6.1,<6.2.0a0|>=6.2,<6.3.0a0|>=6.3,<7.0a0'] python=3.9 -> readline[version='>=8.0,<9.0a0'] -> ncurses[version='>=6.1,<7.0.0a0|>=6.1,<7.0a0']
Package _libgcc_mutex conflicts for: htslib -> libgcc-ng[version='>=12'] -> _libgcc_mutex[version='|0.1',build='conda_forge|main|main'] samtools -> libgcc-ng[version='>=12'] -> _libgcc_mutex[version='|0.1',build='conda_forge|main|main'] python=3.9 -> libgcc-ng[version='>=12'] -> _libgcc_mutex[version='*|0.1',build='conda_forge|main|main']
Package htslib conflicts for: samtools -> htslib[version='>=1.10,<1.11.0a0|>=1.10.2,<1.11.0a0|>=1.11,<1.12.0a0|>=1.12,<1.13.0a0|>=1.13,<1.14.0a0|>=1.14,<1.15.0a0|>=1.15,<1.16.0a0|>=1.16,<1.17.0a0|>=1.9,<1.10.0a0'] htslib
Package bzip2 conflicts for: htslib -> bzip2[version='1.0.|>=1.0.6,<2.0a0|>=1.0.8,<2.0a0'] conda[version='>=23.1.0'] -> python[version='>=3.9,<3.10.0a0'] -> bzip2[version='>=1.0.6,<2.0a0|>=1.0.8,<2.0a0'] python=3.9 -> bzip2[version='>=1.0.8,<2.0a0'] samtools -> bzip2[version='1.0.|>=1.0.6,<2.0a0|>=1.0.8,<2.0a0']
Package libzlib conflicts for: htslib -> libcurl[version='>=7.83.1,<8.0a0'] -> libzlib[version='1.2.11|1.2.11|1.2.11|1.2.12|1.2.12|1.2.12|1.2.12|1.2.12|1.2.13|>=1.2.13,<1.3.0a0',build='h36c2ea0_1012|h166bdaf_1014|h166bdaf_0|h166bdaf_1|h166bdaf_2|h166bdaf_3|h166bdaf_4|h36c2ea0_1013'] htslib -> libzlib[version='>=1.2.11,<1.3.0a0|>=1.2.12,<1.3.0a0']
Package libgcc-ng conflicts for: htslib -> libgcc-ng[version='>=10.3.0|>=12|>=9.4.0|>=9.3.0|>=7.5.0|>=7.3.0|>=4.9'] htslib -> libcurl[version='>=7.83.1,<8.0a0'] -> libgcc-ng[version='>=11.2.0|>=7.2.0']The following specifications were found to be incompatible with your system:
Your installed version is: 2.31