Detect AMRs in mixed samples

tseemann / abricate

:mag_right: :pill: Mass screening of contigs for antimicrobial and virulence genes

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Detect AMRs in mixed samples #208

Open setshabaTaukobong opened 3 months ago

setshabaTaukobong commented 3 months ago

Good day, I am trying to detect AMRs in wastewater so I would not necessarily have a fasta file considering I'm trying to detect from all species present in the sample. Would I be able to do this with abricate?