tseemann / barrnap

:microscope: :leo: Bacterial ribosomal RNA predictor
GNU General Public License v3.0
210 stars 41 forks source link

calling two overlapping sequences separate partial 16S sequences #57

Open ileleiwi opened 3 years ago

ileleiwi commented 3 years ago

I’m running barrnap on a fasta of bins with default settings. The resulting GFF contains some instances where sequential sequences (or sequences with a few bases overlapping) are being called as two partial sequences rather than one more complete sequence. Is this something you have seen before or is there a way to tell if this is an error or maybe two adjacent 16S copies?

image