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tseemann / legsta

🍗⭐ In silico Legionella pneumophila Sequence Based Typing
GNU General Public License v3.0
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Add flag to save/print isPcr output #3

Open andersgs opened 7 years ago

andersgs commented 7 years ago

It would be good to have the option to save the output from isPcr.

I can get it by asking for --debug twice.

tseemann commented 4 years ago

Not sure what to do when the user provides 100 files on the command line here.

Maybe, whenever i encounter a new allelle, I can write it out as:

>FILENAME.GENE
ATTCTCTTAATTATCGCGG....

to a filename specified by --novel OUTFILE

tbazilegith commented 1 year ago

The flag --novel didn't work. it says unknown flag