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tseemann / mlst

:id: Scan contig files against PubMLST typing schemes
GNU General Public License v2.0
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How can i get the number of miss matches? #117

Open mellowo opened 2 years ago

mellowo commented 2 years ago

If it is not 100% match, it is marked as symbol (~, ?). Can i get the exact value of identity? (matched/ entire length)

Thank you.

ne1al commented 1 year ago

@tseemann I was going to ask the same, also for coverage. How can we retrieve those percentages? @mellowo did you figure it out?