Open YaoXinZhi opened 1 year ago
Hi,
I am using mlst for pneumocystis klebsiella typing. I'm wondering how can I get the sequence of each gene directly from the mlst command line.
e.g.
GCF_000693595.1_Kleb_pneu_CHS_31_V1_genomic.fna klebsiella 258 gapA(3) infB(3) mdh(1) pgi(1) phoE(1) rpoB(1) tonB(79)
in this result, how can I get the sequence of gapA(3) or infB(3).
Best wishes, Xinzhi Yao.
Hi,
I am using mlst for pneumocystis klebsiella typing. I'm wondering how can I get the sequence of each gene directly from the mlst command line.
e.g.
GCF_000693595.1_Kleb_pneu_CHS_31_V1_genomic.fna klebsiella 258 gapA(3) infB(3) mdh(1) pgi(1) phoE(1) rpoB(1) tonB(79)in this result, how can I get the sequence of gapA(3) or infB(3).
Best wishes, Xinzhi Yao.