Undefined subroutine &main::path called at /home/roy/nullarbor/bin/nullarbor.pl line 322, <DATA> line 138.

tseemann / nullarbor

:floppy_disk: :page_with_curl: "Reads to report" for public health and clinical microbiology

GNU General Public License v2.0

134 stars 37 forks source link

Undefined subroutine &main::path called at /home/roy/nullarbor/bin/nullarbor.pl line 322, <DATA> line 138. #211

Closed rgranit closed 5 years ago

rgranit commented 5 years ago

When attempting to run nullarbor I encounter the following error: Undefined subroutine &main::path called at /home/roy/nullarbor/bin/nullarbor.pl line 322, <DATA> line 138.

Any suggestions?

Thanks

rgranit commented 5 years ago

If I harcode the $relout variable I can get the nullarbor to work.. so I guess there is some issue with line #322 at nullarbor.pl not sure if it's just in my env.. @tseemann ?

tseemann commented 5 years ago

Do you have Path::Tiny perl module installed?

tseemann commented 5 years ago

Try cpan Path::Tiny to install it.

rgranit commented 5 years ago

Thanks! I will try that out