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tseemann / nullarbor

:floppy_disk: :page_with_curl: "Reads to report" for public health and clinical microbiology
GNU General Public License v2.0
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Kraken quibble #256

Closed biobrad closed 4 years ago

biobrad commented 4 years ago

When extracting this => minikraken_20171019_4GB.tgz

It creates a folder called this => minikraken_20171013_4GB <<<<<< folder has one number different from what Nullarbor check looks for.

Then when you run the Nullarbor check, it does this: [08:06:49] ERROR: Can not find file /home/biobrad/minikraken_20171019_4GB/database.idx required by kraken.

Work around is to obviously change the folder name to the correct name.

tseemann commented 4 years ago

@biobrad hmmm - you are right, how annoying! it seems they got the date wrong on the 4GB one but the 8GB is correct:

minikraken_20171013_4GB
minikraken_20171019_8GB
minikraken_20171101_4GB_dustmasked
minikraken_20171101_8GB_dustmasked

I will fix the docs.