tseemann / nullarbor

:floppy_disk: :page_with_curl: "Reads to report" for public health and clinical microbiology
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Query: Plasmid Annotation #266

Open dan-hud opened 4 years ago

dan-hud commented 4 years ago

Hi, is there any method to annotate which contigs come from plasmids using nullarbor, such as through the use of plasmidSPAdes, PlasmidFinder, or another tool? It would be very helpful for investigations into the propogation of antibiotics resistance genes. If there is no current method is this a planned feature for the future?

Cheers Dan