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tseemann / prokka

:zap: :aquarius: Rapid prokaryotic genome annotation
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prokka for MAGs #464

Closed willnotburn closed 4 years ago

willnotburn commented 4 years ago

What's the best practice for using prokka on metageome-assembled genomes? Specifically, should I use the -p meta flag?

tseemann commented 4 years ago

If you have a MAG it's the same as a draft isolate genome, so no need to use any "metagenome" flags.