I am trying to load the outputted data into mauve but am having the issue where its not in the XMFA file format. i have trued to use the code provided on github using --centre XXX and egrep -v '^(ACCESSION|VERSION)' prokka.gbk > mauve.gbk but am still getting the same issue when trying to load the .gbk file into mauve.
Am probably doing something obviously wrong but can't see it, any help would be greatly appreciated.
Hey there,
I am trying to load the outputted data into mauve but am having the issue where its not in the XMFA file format. i have trued to use the code provided on github using --centre XXX and egrep -v '^(ACCESSION|VERSION)' prokka.gbk > mauve.gbk but am still getting the same issue when trying to load the .gbk file into mauve.
Am probably doing something obviously wrong but can't see it, any help would be greatly appreciated.