tseemann / prokka

:zap: :aquarius: Rapid prokaryotic genome annotation
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rna and CDS overlapped with no --cdsrnaolap set #591

Open lijierr opened 3 years ago

lijierr commented 3 years ago

I've got a result like below without --cdsrnaolap set.

contig_7_pilon Infernal:001001 misc_RNA 275421 276175 457.7 - . ID=bins.tsv.054_01659 contig_7_pilon Prodigal:002006 CDS 275498 276202 . - 0 ID=bins.tsv.054_01660

Would you mind to suggest what should I do to avoid overlaps? For example, I want to drop bins.tsv.054_01660 as a CDS under the circumstance.