Hi,
I installed prokka and roary using conda. However, when I run the programs, they are showing the following error. Any help will be appreciated to solve the problem.
Error:
(myenv) @A8-VT--U:~/anaconda3/bin$ prokka
Can't locate Bio/Root/Version.pm in @INC (you may need to install the Bio::Root::Version module) (@INC contains: /home/anaconda3/envs/myenv/bin/../perl5 /home/anaconda3/envs/myenv/lib/perl5/5.32/site_perl /home/anaconda3/envs/myenv/lib/perl5/site_perl /home/anaconda3/envs/myenv/lib/perl5/5.32/vendor_perl /home/anaconda3/envs/myenv/lib/perl5/vendor_perl /home/anaconda3/envs/myenv/lib/perl5/5.32/core_perl /home/anaconda3/envs/myenv/lib/perl5/core_perl .) at /home/anaconda3/envs/myenv/bin/prokka line 32.
BEGIN failed--compilation aborted at /home/anaconda3/envs/myenv/bin/prokka line 32.
(myenv) @A8-VT--U:~/anaconda3/bin$ roary
Can't locate Bio/Roary/CommandLine/Roary.pm in @INC (you may need to install the Bio::Roary::CommandLine::Roary module) (@INC contains: /home/anaconda3/bin/lib /home/anaconda3/envs/myenv/lib/perl5/5.32/site_perl /home/anaconda3/envs/myenv/lib/perl5/site_perl /home/anaconda3/envs/myenv/lib/perl5/5.32/vendor_perl /home/anaconda3/envs/myenv/lib/perl5/vendor_perl /home/anaconda3/envs/myenv/lib/perl5/5.32/core_perl /home/anaconda3/envs/myenv/lib/perl5/core_perl .) at /home/anaconda3/envs/myenv/bin/roary line 12.
BEGIN failed--compilation aborted at /home/anaconda3/envs/myenv/bin/roary line 12.
(myenv) @A8-VT--U:~/anaconda3/bin$
Hi, I installed prokka and roary using conda. However, when I run the programs, they are showing the following error. Any help will be appreciated to solve the problem.
Error:
(myenv) @A8-VT--U:~/anaconda3/bin$ prokka Can't locate Bio/Root/Version.pm in @INC (you may need to install the Bio::Root::Version module) (@INC contains: /home/anaconda3/envs/myenv/bin/../perl5 /home/anaconda3/envs/myenv/lib/perl5/5.32/site_perl /home/anaconda3/envs/myenv/lib/perl5/site_perl /home/anaconda3/envs/myenv/lib/perl5/5.32/vendor_perl /home/anaconda3/envs/myenv/lib/perl5/vendor_perl /home/anaconda3/envs/myenv/lib/perl5/5.32/core_perl /home/anaconda3/envs/myenv/lib/perl5/core_perl .) at /home/anaconda3/envs/myenv/bin/prokka line 32. BEGIN failed--compilation aborted at /home/anaconda3/envs/myenv/bin/prokka line 32.
(myenv) @A8-VT--U:~/anaconda3/bin$ roary
Can't locate Bio/Roary/CommandLine/Roary.pm in @INC (you may need to install the Bio::Roary::CommandLine::Roary module) (@INC contains: /home/anaconda3/bin/lib /home/anaconda3/envs/myenv/lib/perl5/5.32/site_perl /home/anaconda3/envs/myenv/lib/perl5/site_perl /home/anaconda3/envs/myenv/lib/perl5/5.32/vendor_perl /home/anaconda3/envs/myenv/lib/perl5/vendor_perl /home/anaconda3/envs/myenv/lib/perl5/5.32/core_perl /home/anaconda3/envs/myenv/lib/perl5/core_perl .) at /home/anaconda3/envs/myenv/bin/roary line 12. BEGIN failed--compilation aborted at /home/anaconda3/envs/myenv/bin/roary line 12. (myenv) @A8-VT--U:~/anaconda3/bin$