I would like to get just the structural annotation (position of cds, trna, rna, etc ) and not the functional annotation (product names of each CDS), Can I skip the steps of blast?
I saw that with --fast option I just skip the hmmer step, but not blast steps.
I would like to do it to accelerate the process of hundreds of genomes, blast is the most time consuming time step.
Any idea?
Thanks
I would like to get just the structural annotation (position of cds, trna, rna, etc ) and not the functional annotation (product names of each CDS), Can I skip the steps of blast? I saw that with --fast option I just skip the hmmer step, but not blast steps. I would like to do it to accelerate the process of hundreds of genomes, blast is the most time consuming time step. Any idea? Thanks