I run prokka with different options, but when I run the analysis of a 4.6Mba genome, about 10000 CDS are identified and the closest genome has 4600 CDS, what can be the problem? Also, when I run the analysis with a reference genome obtained from NCBI, the CDS prediction is coincident with the reported data.
I run prokka with different options, but when I run the analysis of a 4.6Mba genome, about 10000 CDS are identified and the closest genome has 4600 CDS, what can be the problem? Also, when I run the analysis with a reference genome obtained from NCBI, the CDS prediction is coincident with the reported data.
regards