tsherwen / AC_tools

Module for working with global/regional Chemical Transport Model (CTM) output and observations
MIT License
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AC_tools in python2 environment installation #123

Open Portaler opened 2 years ago

Portaler commented 2 years ago

Hey guys, I've installed AC_tools in python2.7.5 environment with all the required packages installed (iris1.13.0, Pygchem0.3.0 etc). But when I import AC_tools in python, the bug report is as follows:

import AC_tools as AC Traceback (most recent call last): File "", line 1, in File "/home/BaiXiaoxuan/anaconda3/envs/py2_env/lib/python2.7/site-packages/AC_tools-0.1.1-py2.7.egg/AC_tools/init.py", line 7, in from . core import File "/home/BaiXiaoxuan/anaconda3/envs/py2_env/lib/python2.7/site-packages/AC_tools-0.1.1-py2.7.egg/AC_tools/core.py", line 12, in from netCDF4 import Dataset File "/home/BaiXiaoxuan/anaconda3/envs/py2_env/lib/python2.7/site-packages/netCDF4/init.py", line 3, in from ._netCDF4 import ImportError: /home/BaiXiaoxuan/anaconda3/envs/py2_env/lib/python2.7/site-packages/netCDF4/../../.././libcurl.so.4: undefined symbol: SSL_COMP_free_compression_methods

Do anybody know what's wrong? Possibly the version of packages conflict? By the way, I have to use AC_tools in python2 because of the bpch2nc fnuction : ) And my conda list:

Name Version Build Channel

_libgcc_mutex 0.1 conda_forge conda-forge _openmp_mutex 4.5 2_gnu conda-forge ac-tools 0.1.1 pypi_0 pypi asn1crypto 1.4.0 pyh9f0ad1d_0 conda-forge backports_abc 0.5 py_1 conda-forge biggus 0.15.0 py_1 conda-forge blas 1.1 openblas conda-forge bokeh 0.13.0 py27_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/pkgs/main bottleneck 1.2.1 py27h3010b51_1001 conda-forge brotlipy 0.7.0 py27h516909a_1000 conda-forge cairo 1.12.18 6 https://mirrors.tuna.tsinghua.edu.cn/anaconda/pkgs/free cartopy 0.17.0 py27h0aa2c8f_1004 conda-forge certifi 2019.11.28 py27h8c360ce_1 conda-forge cf_units 1.2.0 py27_0 conda-forge cffi 1.14.0 py27hd463f26_0 conda-forge cftime 1.0.3.4 py27hd352d35_1001 conda-forge chardet 3.0.4 py27h8c360ce_1006 conda-forge cloudpickle 0.4.0 py_1 conda-forge colorama 0.4.4 pyh9f0ad1d_0 conda-forge conda 4.8.3 py27h8c360ce_1 conda-forge conda-package-handling 1.6.0 py27hdf8410d_2 conda-forge cryptography 2.2.1 py27_0 conda-forge curl 7.52.1 0 conda-forge cycler 0.10.0 py27_0 conda-forge cyordereddict 1.0.0 py27h516909a_1002 conda-forge dask 0.15.2 py27_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/pkgs/free dbus 1.13.6 he372182_0 conda-forge ecmwf_grib 1.23.1 0 conda-forge enum34 1.1.10 py27h8c360ce_1 conda-forge ephem 3.7.6.0 py27_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/pkgs/free expat 2.4.8 h27087fc_0 conda-forge fontconfig 2.11.1 6 https://mirrors.tuna.tsinghua.edu.cn/anaconda/pkgs/free freetype 2.5.5 2 https://mirrors.tuna.tsinghua.edu.cn/anaconda/pkgs/free functools32 3.2.3.2 py_3 conda-forge futures 3.3.0 py27h8c360ce_1 conda-forge geos 3.7.1 hf484d3e_1000 conda-forge gettext 0.19.8.1 hf34092f_1004 conda-forge glib 2.58.3 py27he9b9f4b_1003 conda-forge gst-plugins-base 1.14.0 hbbd80ab_1 https://mirrors.tuna.tsinghua.edu.cn/anaconda/pkgs/main gstreamer 1.14.0 hb453b48_1 https://mirrors.tuna.tsinghua.edu.cn/anaconda/pkgs/main h5netcdf 0.4.0 py27_0 conda-forge h5py 2.7.0 np111py27_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/pkgs/free hdf4 4.2.12 0 conda-forge hdf5 1.8.17 11 conda-forge icu 54.1 0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/pkgs/free idna 2.10 pyh9f0ad1d_0 conda-forge ipaddress 1.0.23 py_0 conda-forge iris 1.13.0 py27h24bf2e0_2 conda-forge iris-grib 0.10.1 py27_0 conda-forge jasper 1.900.1 1 conda-forge jbig 2.1 h7f98852_2003 conda-forge jinja2 2.11.3 pyh44b312d_0 conda-forge jpeg 9e h166bdaf_1 conda-forge krb5 1.13.2 0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/pkgs/free libblas 3.9.0 15_linux64_openblas conda-forge libcblas 3.9.0 15_linux64_openblas conda-forge libffi 3.2.1 he1b5a44_1007 conda-forge libgcc 7.2.0 h69d50b8_2 conda-forge libgcc-ng 12.1.0 h8d9b700_16 conda-forge libgfortran 3.0.0 1 conda-forge libgfortran-ng 12.1.0 h69a702a_16 conda-forge libgfortran5 12.1.0 hdcd56e2_16 conda-forge libgomp 12.1.0 h8d9b700_16 conda-forge libiconv 1.16 h516909a_0 conda-forge liblapack 3.9.0 15_linux64_openblas conda-forge libmo_unpack 3.1.2 hf484d3e_1001 conda-forge libnetcdf 4.4.1 0 conda-forge libopenblas 0.3.20 h043d6bf_1 https://mirrors.tuna.tsinghua.edu.cn/anaconda/pkgs/main libpng 1.6.37 h21135ba_2 conda-forge libsolv 0.7.22 h6239696_0 conda-forge libstdcxx-ng 12.1.0 ha89aaad_16 conda-forge libtiff 4.0.6 7 conda-forge libxcb 1.13 h7f98852_1004 conda-forge libxml2 2.9.4 0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/pkgs/free libzlib 1.2.12 h166bdaf_0 conda-forge locket 1.0.0 pyhd8ed1ab_0 conda-forge mamba 0.1.0 py27hc9558a2_2 conda-forge markupsafe 1.1.1 py27hdf8410d_1 conda-forge matplotlib 1.5.1 np111py27_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/pkgs/free mo_pack 0.2.0 py27h3010b51_1003 conda-forge nc-time-axis 1.2.0 py_0 conda-forge ncurses 5.9 10 conda-forge netcdf4 1.2.4 np111py27_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/pkgs/free numpy 1.11.3 py27_blas_openblas_202 [blas_openblas] conda-forge openblas 0.2.19 2 conda-forge openssl 1.0.1k 1 https://mirrors.tuna.tsinghua.edu.cn/anaconda/pkgs/free owslib 0.18.0 py_0 conda-forge packaging 16.8 py27_0 conda-forge pandas 0.22.0 py27_1 conda-forge partd 0.3.8 py27_0 conda-forge pcre 8.45 h9c3ff4c_0 conda-forge pillow 3.2.0 py27_1 conda-forge pip 20.0.2 py27_1 conda-forge pixman 0.32.6 0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/pkgs/free proj4 5.2.0 he1b5a44_1006 conda-forge pthread-stubs 0.4 h36c2ea0_1001 conda-forge py 1.11.0 pyh6c4a22f_0 conda-forge pycairo 1.10.0 py27_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/pkgs/free pycosat 0.6.3 py27hdf8410d_1004 conda-forge pycparser 2.21 pyhd8ed1ab_0 conda-forge pyepsg 0.4.0 py_0 conda-forge pygchem 0.3.0.dev0 pypi_0 pypi pykdtree 1.3.1 py27h3010b51_1002 conda-forge pyke 1.1.1 py27h8c360ce_1002 conda-forge pyopenssl 19.0.0 py27_0 conda-forge pyparsing 2.4.7 pyh9f0ad1d_0 conda-forge pyproj 1.9.6 py27h516909a_1002 conda-forge pyqt 4.11.4 py27_3 conda-forge pyshp 2.1.3 pyh44b312d_0 conda-forge pysocks 1.7.1 py27h8c360ce_1 conda-forge pytest 2.8.3 py27_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/menpo python 2.7.5 3 https://mirrors.tuna.tsinghua.edu.cn/anaconda/pkgs/free python-dateutil 2.8.1 py_0 conda-forge python-ecmwf_grib 1.23.1 py27_0 conda-forge python_abi 2.7 1_cp27mu conda-forge pytz 2019.3 py_0 conda-forge pyyaml 5.3.1 py27hdf8410d_0 conda-forge qt 4.8.7 2 https://mirrors.tuna.tsinghua.edu.cn/anaconda/pkgs/free readline 6.2 0 conda-forge requests 2.25.1 pyhd3deb0d_0 conda-forge ruamel_yaml 0.15.80 py27hdf8410d_1001 conda-forge scipy 0.19.1 py27_blas_openblas_202 [blas_openblas] conda-forge setuptools 36.4.0 py27_1 https://mirrors.tuna.tsinghua.edu.cn/anaconda/pkgs/free shapely 1.6.4 py27h2afed24_1004 conda-forge singledispatch 3.6.1 pyh44b312d_0 conda-forge sip 4.18 py27_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/pkgs/free six 1.16.0 pyh6c4a22f_0 conda-forge sqlite 3.13.0 0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/pkgs/free subprocess32 3.5.4 py27h516909a_0 conda-forge system 5.8 2 https://mirrors.tuna.tsinghua.edu.cn/anaconda/pkgs/free tk 8.5.18 0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/pkgs/free toolz 0.8.2 py27_1 conda-forge tornado 5.1.1 py27h14c3975_1000 conda-forge tqdm 4.64.0 pyhd8ed1ab_0 conda-forge udunits2 2.2.28 hc3e0081_0 conda-forge urllib3 1.26.9 pyhd8ed1ab_0 conda-forge wheel 0.37.1 pyhd8ed1ab_0 conda-forge xarray 0.10.0 py27_0 conda-forge xorg-libxau 1.0.9 h7f98852_0 conda-forge xorg-libxdmcp 1.1.3 h7f98852_0 conda-forge xz 5.2.5 h516909a_1 conda-forge yaml 0.2.5 h7f98852_2 conda-forge zlib 1.2.12 h166bdaf_0 conda-forge