search

tttianhao / CLEAN

CLEAN: a contrastive learning model for high-quality functional prediction of proteins
MIT License
224 stars 44 forks source link

Question to protein language model #5

Closed wangleiofficial closed 1 year ago

wangleiofficial commented 1 year ago

Hi, congratulations！protein language models have played a key role in the protein feature extraction. Since none of the methods you compared use a language model, is that the main reason your method is good. I think supervised contrastive learning should not be so different from supervised learning. Our lab has also developed a lightweight protein language model (ProtFlash), and we would like to collaborate to test this approach if given the opportunity.

tttianhao commented 1 year ago

Hi, let's continue our discussion through email. Since the issue is not code related, I'm closing the issue for now.