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twmht / python-rocksdb

Python bindings for RocksDB
BSD 3-Clause "New" or "Revised" License
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pybind11 branch install failed #80

Open itboyljm opened 4 years ago

itboyljm commented 4 years ago

hello, I am using pyrocksdb of branch pybind11, while I was installing pyrocksdb according to the wiki of link: https://github.com/twmht/python-rocksdb/tree/pybind11#quick-install I met the failure whose error log is as follow: [ 92%] Linking CXX executable db_bench [ 94%] Built target pyrocksdb Scanning dependencies of target range_del_aggregator_bench [ 94%] Building CXX object lib/rocksdb/CMakeFiles/range_del_aggregator_bench.dir/db/range_del_aggregator_bench.cc.o /usr/bin/ld: cannot find -ltestharness collect2: error: ld returned 1 exit status gmake[2]: [lib/rocksdb/table_reader_bench] Error 1 gmake[1]: [lib/rocksdb/CMakeFiles/table_reader_bench.dir/all] Error 2 gmake[1]: Waiting for unfinished jobs.... /usr/bin/ld: CMakeFiles/db_bench.dir/tools/db_bench_tool.cc.o: undefined reference to symbol '_ZN6google15SetUsageMessageERKSs' //usr/local/lib/libgflags.so.2: error adding symbols: DSO missing from command line collect2: error: ld returned 1 exit status gmake[2]: [lib/rocksdb/db_bench] Error 1 gmake[1]: [lib/rocksdb/CMakeFiles/db_bench.dir/all] Error 2 /usr/bin/ld: CMakeFiles/hash_table_bench.dir/utilities/persistent_cache/hash_table_bench.cc.o: undefined reference to symbol '_ZN6google15SetUsageMessageERKSs' //usr/local/lib/libgflags.so.2: error adding symbols: DSO missing from command line collect2: error: ld returned 1 exit status gmake[2]: [lib/rocksdb/hash_table_bench] Error 1 gmake[1]: [lib/rocksdb/CMakeFiles/hash_table_bench.dir/all] Error 2 [ 94%] Linking CXX executable range_del_aggregator_bench /usr/bin/ld: CMakeFiles/range_del_aggregator_bench.dir/db/range_del_aggregator_bench.cc.o: undefined reference to symbol '_ZN6google21ParseCommandLineFlagsEPiPPPcb' //usr/local/lib/libgflags.so.2: error adding symbols: DSO missing from command line collect2: error: ld returned 1 exit status gmake[2]: [lib/rocksdb/range_del_aggregator_bench] Error 1 gmake[1]: [lib/rocksdb/CMakeFiles/range_del_aggregator_bench.dir/all] Error 2 gmake: [all] Error 2 Traceback (most recent call last): File "setup.py", line 125, in zip_safe=False, File "/data/projects/fate/common/python/venv/lib/python3.6/site-packages/setuptools/init.py", line 145, in setup return distutils.core.setup(**attrs) File "/data/projects/fate/common/miniconda3/lib/python3.6/distutils/core.py", line 148, in setup dist.run_commands() File "/data/projects/fate/common/miniconda3/lib/python3.6/distutils/dist.py", line 955, in run_commands self.run_command(cmd) File "/data/projects/fate/common/miniconda3/lib/python3.6/distutils/dist.py", line 974, in run_command cmd_obj.run() File "/data/projects/fate/common/python/venv/lib/python3.6/site-packages/setuptools/command/install.py", line 67, in run self.do_egg_install() File "/data/projects/fate/common/python/venv/lib/python3.6/site-packages/setuptools/command/install.py", line 109, in do_egg_install self.run_command('bdist_egg') File "/data/projects/fate/common/miniconda3/lib/python3.6/distutils/cmd.py", line 313, in run_command self.distribution.run_command(command) File "/data/projects/fate/common/miniconda3/lib/python3.6/distutils/dist.py", line 974, in run_command cmd_obj.run() File "/data/projects/fate/common/python/venv/lib/python3.6/site-packages/setuptools/command/bdist_egg.py", line 172, in run cmd = self.call_command('install_lib', warn_dir=0) File "/data/projects/fate/common/python/venv/lib/python3.6/site-packages/setuptools/command/bdist_egg.py", line 158, in call_command self.run_command(cmdname) File "/data/projects/fate/common/miniconda3/lib/python3.6/distutils/cmd.py", line 313, in run_command self.distribution.run_command(command) File "/data/projects/fate/common/miniconda3/lib/python3.6/distutils/dist.py", line 974, in run_command cmd_obj.run() File "/data/projects/fate/common/python/venv/lib/python3.6/site-packages/setuptools/command/install_lib.py", line 11, in run self.build() File "/data/projects/fate/common/miniconda3/lib/python3.6/distutils/command/install_lib.py", line 107, in build self.run_command('build_ext') File "/data/projects/fate/common/miniconda3/lib/python3.6/distutils/cmd.py", line 313, in run_command self.distribution.run_command(command) File "/data/projects/fate/common/miniconda3/lib/python3.6/distutils/dist.py", line 974, in run_command cmd_obj.run() File "setup.py", line 40, in run self.build_extension(ext) File "setup.py", line 76, in build_extension cwd=self.build_temp) File "/data/projects/fate/common/miniconda3/lib/python3.6/subprocess.py", line 291, in check_call raise CalledProcessError(retcode, cmd) subprocess.CalledProcessError: Command '['cmake', '--build', '.', '--config', 'Release', '--', '-j4']' returned non-zero exit status 2.

itboyljm commented 4 years ago

I am confused about that, because I successfully installed pyrocksdb of master branch and am using it right now. So, I think the dependencies are fully installed :)

xyb commented 4 years ago

This looks like a rocksdb issue, you may need to update to the latest source code to compile it:

cd lib/rocksdb
git checkout master
git pull
cd ../..
python setup.py install