Closed yekaizhou closed 2 years ago
Hi, Can you provide the commands and files you use? Thanks.
it turned out that the expected input vcf should not be compressed. thanks a lot.
@twolinin I ran in to the same issue, it would be a nice feature to allow the input file to be a gzipped compressed VCF.
@cjw85 Agreed. We will push a new version supporting gz VCF.
The gzipped VCF is now supported. Please download the latest version tomorrow (our server is under maintanence now). We shall move it to Github version release later.
Thanks @ythuang0522, I'll check it out.
Hi,
The parsing of chrom/contigs can perform normally, but when entering the stage of writing results, it will bump out segmentation fault.
I am using an HG001 8X ONT alignment file, along with the corresponding cuteSV and Clair3 called VCF files as the input of LongPhase.