Header add pg tag - Githubissues

twolinin / longphase

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Header add pg tag #72

Closed sloth-eat-pudding closed 2 months ago

sloth-eat-pudding commented 2 months ago

Using the command samtools view -H read_file, can view the haplotag records within the read_file header.

@PG     ID:longphase.140        PN:longphase    PP:samtools.283 VN:1.7.2dev     CL:longphase haplotag -b hg002.sup.10x.bam -r GCA_000001405.15_GRCh38_no_alt_analysis_set.fa -s result.vcf -t 100 --region chr20