search

twopin / CAMP

predicting peptide-protein interactions
116 stars 30 forks source link

interpretion of results #32

Open mariemghoula opened 1 year ago

mariemghoula commented 1 year ago

Hello @twopin,

Is it possible to have a clear protocol on how to interpret the results? which files should we look at? How to open the files and the significance of each value? And once this is done, how do we generate a file to see the interactions between the proteins and peptides?

Thank you.

twopin commented 1 year ago

You mean the predicted score of peptide binding residue? The model should output a vector of the peptide length size (left-padded to 50). At each position, the score indicates the binding probability of that AA being interacting with the partner protein.