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twopin / CAMP

predicting peptide-protein interactions
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We couldn't run program #34

Closed denizozcivi closed 1 year ago

denizozcivi commented 1 year ago

Hi Dear,

Firstly, many thanks for the application. We couldn't run this application using Visual code studio. We are facing a python version problem. Do you have an updated version of this code from python 2.7 to 3

Or what should we do to run this application?

Regards, Deniz

twopin commented 1 year ago

The python3 +pytorch script and ckpts are under in "CAMP_pytorch".

denizozcivi commented 1 year ago

I am still facing problem to run this application. I am receiving some files are missing. For example, I can't find datafile. I am not professional code side maybe I am missing some of the steps. If we can quick chat to understand this application, it might perfect for me. Because I am planning to use your code in my thesis. But I can't get any output and I can't make any presentation about this. denizozcivi@gmail.com and I am happy to talk on the phone if you have time to small help.

Best Regards, Deniz

twopin commented 1 year ago

Sure. My email is twopinlei@hotmail.com and if you need some help we can schedule a zoom meeting or something like that. I can quickly introduce the workflow. There are indeed some filenames you need to change with your own data or intermediate feature files. And I think you need to have basic python knowledge to manipulate your data format.